RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 LSP1P33241 339 aa16.76■□□□□ 0.27
NELFCD-201ENST00000460601 CSRP3P50461 194 aa16.76■□□□□ 0.27
NELFCD-201ENST00000460601 SEC24CP53992 1094 aa16.76■□□□□ 0.27
NELFCD-201ENST00000460601 SATB1Q01826 763 aa16.76■□□□□ 0.27
NELFCD-201ENST00000460601 SDCCAG8Q86SQ7 713 aaPredicted RBP16.76■□□□□ 0.27
NELFCD-201ENST00000460601 AADATQ8N5Z0 425 aa16.76■□□□□ 0.27
NELFCD-201ENST00000460601 LPGAT1Q92604 370 aa16.76■□□□□ 0.27
NELFCD-201ENST00000460601 DNASE1L2Q92874 299 aa16.76■□□□□ 0.27
NELFCD-201ENST00000460601 ALKBH8Q96BT7 664 aaKnown RBP16.76■□□□□ 0.27
NELFCD-201ENST00000460601 BOCQ9BWV1 1114 aa16.76■□□□□ 0.27
NELFCD-201ENST00000460601 SLC30A1Q9Y6M5 507 aa16.76■□□□□ 0.27
NELFCD-201ENST00000460601 ZNF106Q9H2Y7 1883 aaKnown RBP16.76■□□□□ 0.27
NELFCD-201ENST00000460601 WDR91A4D1P6 747 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 KLF8O95600 359 aaPredicted RBP16.75■□□□□ 0.27
NELFCD-201ENST00000460601 COL9A1P20849 921 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 FMO4P31512 558 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 SPAM1P38567 509 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 P2RY2P41231 377 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 SPINT3P49223 89 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 TIAL1Q01085 375 aaKnown RBP eCLIP16.75■□□□□ 0.275e-6■■■□□ 19
NELFCD-201ENST00000460601 GRSF1Q12849 480 aaKnown RBP eCLIP16.75■□□□□ 0.27
NELFCD-201ENST00000460601 CNTN1Q12860 1018 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 DNAJC3Q13217 504 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 CAMK2GQ13555 558 aaPredicted RBP16.75■□□□□ 0.27
NELFCD-201ENST00000460601 HECTD2Q5U5R9 776 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 SUGP1Q8IWZ8 645 aaKnown RBP16.75■□□□□ 0.27
NELFCD-201ENST00000460601 LMNTD2Q8IXW0 634 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 DYDC1Q8WWB3 177 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 SGSM3Q96HU1 749 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 SUN2Q9UH99 717 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 SYNCRIPO60506 623 aaKnown RBP16.75■□□□□ 0.27
NELFCD-201ENST00000460601 SHOX2O60902 331 aaPredicted RBP16.75■□□□□ 0.27
NELFCD-201ENST00000460601 STMN1P16949 149 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 GM2AP17900 193 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 DRD3P35462 400 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 ETV4P43268 484 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 COPAP53621 1224 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 CACNG1Q06432 222 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 TDGQ13569 410 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 ATP13A5Q4VNC0 1218 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 GPR153Q6NV75 609 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 LIPIQ6XZB0 460 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 GALNT7Q86SF2 657 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 GABPB2Q8TAK5 448 aaPredicted RBP16.75■□□□□ 0.27
NELFCD-201ENST00000460601 BIRC8Q96P09 236 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 MECRQ9BV79 373 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 IQCGQ9H095 443 aaKnown RBP16.75■□□□□ 0.27
NELFCD-201ENST00000460601 EMCNQ9ULC0 261 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 NDRG2Q9UN36 371 aaKnown RBP16.75■□□□□ 0.27
NELFCD-201ENST00000460601 MED16Q9Y2X0 877 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 PLLPQ9Y342 182 aa16.75■□□□□ 0.27
NELFCD-201ENST00000460601 A0A1W2PQF6 199 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 IQCF5A8MTL0 148 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 NDUFS3O75489 264 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 ZWINTO95229 277 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 ELFN1P0C7U0 828 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 CYP2A6P11509 494 aaPredicted RBP16.74■□□□□ 0.27
NELFCD-201ENST00000460601 NTSR1P30989 418 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 CRHR1P34998 444 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 CCT5P48643 541 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 RAB10P61026 200 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 ZKSCAN8Q15776 578 aaPredicted RBP16.74■□□□□ 0.27
NELFCD-201ENST00000460601 CST6Q15828 149 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 DBN1Q16643 649 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 SLC44A4Q53GD3 710 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 DPPA4Q7L190 304 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 SERPINA9Q86WD7 417 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 ARMC2Q8NEN0 867 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 RSPH9Q9H1X1 276 aaPredicted RBP16.74■□□□□ 0.27
NELFCD-201ENST00000460601 C8orf33Q9H7E9 229 aaPredicted RBP16.74■□□□□ 0.27
NELFCD-201ENST00000460601 TMEM216Q9P0N5 145 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 GALPQ9UBC7 116 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 FAM50BQ9Y247 325 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 A0A0C4DFX4 3053 aa16.74■□□□□ 0.27
NELFCD-201ENST00000460601 SRFP11831 508 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 ZNF30P17039 623 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 GLRBP48167 497 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 LIG3P49916 1009 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 CLCN5P51795 746 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 DLG1Q12959 904 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 N4BP2L1Q5TBK1 243 aaPredicted RBP16.73■□□□□ 0.27
NELFCD-201ENST00000460601 ERAP2Q6P179 960 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 TMEM207Q6UWW9 146 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 ERN2Q76MJ5 926 aaKnown RBP16.73■□□□□ 0.27
NELFCD-201ENST00000460601 SNX20Q7Z614 316 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 DSG4Q86SJ6 1040 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 CENPLQ8N0S6 344 aaPredicted RBP16.73■□□□□ 0.27
NELFCD-201ENST00000460601 PELI3Q8N2H9 469 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 CLDN19Q8N6F1 224 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 RPLP0P6Q8NHW5 317 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 HCAR2Q8TDS4 363 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 ACMSDQ8TDX5 336 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 KCTD4Q8WVF5 259 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 FAM3CQ92520 227 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 PPP1R16AQ96I34 528 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 DYRK4Q9NR20 520 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 INTS10Q9NVR2 710 aaKnown RBP16.73■□□□□ 0.27
NELFCD-201ENST00000460601 APPL1Q9UKG1 709 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 VWA7Q9Y334 891 aa16.73■□□□□ 0.27
NELFCD-201ENST00000460601 C1QTNF3-AMACRE9PGA6 284 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms