RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 EPB41L2O43491 1005 aaKnown RBP2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 JRKO75564 520 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 IPO7O95373 1038 aaKnown RBP2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 IGLV2-11P01706 119 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 CDH1P12830 882 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 HLA-DOBP13765 273 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 GNL1P36915 607 aaPredicted RBP2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 PRCPP42785 496 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 FUT6P51993 359 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 F2RL1P55085 397 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 RPS3AP61247 264 aaKnown RBP2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 ZBED6P86452 979 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 DECR1Q16698 335 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 ACCSLQ4AC99 568 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 BRAT1Q6PJG6 821 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 GFRALQ6UXV0 394 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 DSTYKQ6XUX3 929 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 FOXL2NBQ6ZUU3 175 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 CERS3Q8IU89 383 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 ODF3L1Q8IXM7 274 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 FRMD1Q8N878 549 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 THAP6Q8TBB0 222 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 DUSP19Q8WTR2 217 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 ARHGEF2Q92974 986 aaKnown RBP2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 PIGTQ969N2 578 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 TAAR8Q969N4 342 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 ARHGEF26Q96DR7 871 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 PERPQ96FX8 193 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 GRAMD2BQ96HH9 432 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 QRFPRQ96P65 431 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 EPYCQ99645 322 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 VPS33BQ9H267 617 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 SLC28A3Q9HAS3 691 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 PLEKHA5Q9HAU0 1116 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 LRRC4Q9HBW1 653 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 RANGRFQ9HD47 186 aaPredicted RBP2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 KLHL1Q9NR64 748 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 EHD2Q9NZN4 543 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 UBA2Q9UBT2 640 aaPredicted RBP2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 ZNF69Q9UC07 566 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 LIMA1Q9UHB6 759 aaKnown RBP2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 KCNE2Q9Y6J6 123 aa2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 TDRD9Q8NDG6 1382 aaKnown RBP2.95□□□□□ -1.94
SCARNA18-201ENST00000459004 PTPRCP08575 1304 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 FAM237BA0A1B0GVD1 139 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 A0A1W2PQF6 199 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 C1orf226A1L170 272 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 M0QZ24 198 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 HS3ST1O14792 307 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 NDUFS3O75489 264 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 MLYCDO95822 493 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 TBX18O95935 607 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 IGKV3-20P01619 116 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 CD4P01730 458 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 EIF2S1P05198 315 aaKnown RBP2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 MYOD1P15172 320 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 CDH2P19022 906 aaPredicted RBP2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 UBA1P22314 1058 aaKnown RBP2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 KCNA5P22460 613 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 CHMP24386 653 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 MT3P25713 68 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 NFKBIAP25963 317 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 CORO1AP31146 461 aaKnown RBP2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 PBX3P40426 434 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 TAS2R38P59533 333 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 EEF1A1P68104 462 aaKnown RBP2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 CEBPZQ03701 1054 aaKnown RBP2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 ACSM2AQ08AH3 577 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 NIPAL4Q0D2K0 466 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 ARL16Q0P5N6 197 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 HYAL1Q12794 435 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 MAD2L1Q13257 205 aaPredicted RBP2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 GTF2H2Q13888 395 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 ADIPOQQ15848 244 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 CDONQ4KMG0 1287 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 SOWAHCQ53LP3 525 aaPredicted RBP2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 EEF1A1P5Q5VTE0 462 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 ZNF280DQ6N043 979 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 GTF2H2CQ6P1K8 395 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 CYP20A1Q6UW02 462 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 GDPD4Q6W3E5 623 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 GPR180Q86V85 440 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 NRROSQ86YC3 692 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 ARHGAP12Q8IWW6 846 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 SRBD1Q8N5C6 995 aaKnown RBP2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 PPHLN1Q8NEY8 458 aaKnown RBP2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 DNAAF4Q8WXU2 420 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 RHBDF1Q96CC6 855 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 MPP4Q96JB8 637 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 SEPT5Q99719 369 aaPredicted RBP2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 SIL1Q9H173 461 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 MAGIXQ9H6Y5 334 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 FKRPQ9H9S5 495 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 POLR1BQ9H9Y6 1135 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 SEBOXQ9HB31 216 aaPredicted RBP2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 TCF7L2Q9NQB0 619 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 DIAPH3Q9NSV4 1193 aa2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 OLA1Q9NTK5 396 aaKnown RBP2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 ORC3Q9UBD5 711 aaPredicted RBP2.94□□□□□ -1.94
SCARNA18-201ENST00000459004 AASSQ9UDR5 926 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms