RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 PCCBP05166 539 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 CALB1P05937 261 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 ANXA6P08133 673 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 SKILP12757 684 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 CTSEP14091 401 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 XPAP23025 273 aaPredicted RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 LSSP48449 732 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 PAPOLAP51003 745 aaKnown RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 DUSP3P51452 185 aaPredicted RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 ZNF143P52747 638 aaPredicted RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 GEMIN4P57678 1058 aaKnown RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 TPI1P60174 286 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 CCL7P80098 99 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 PPARDQ03181 441 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 TLE3Q04726 772 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 RAD51Q06609 339 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 MAMLD1Q13495 774 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 DOC2BQ14184 412 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 PTK2BQ14289 1009 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 NCAPHQ15003 741 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 PTPRRQ15256 657 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 IRF4Q15306 451 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 NR0B2Q15466 257 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 UGP2Q16851 508 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 WSCD2Q2TBF2 565 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 TMEM52BQ4KMG9 183 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 INO80DQ53TQ3 878 aaPredicted RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 ZCCHC8Q6NZY4 707 aaKnown RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 DNAJC24Q6P3W2 148 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 DCUN1D2Q6PH85 259 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 PCSK4Q6UW60 755 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 RBM43Q6ZSC3 357 aaKnown RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 ZNF765Q7L2R6 523 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 APTXQ7Z2E3 356 aaKnown RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 GPR155Q7Z3F1 870 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 ZSWIM9Q86XI8 627 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 SLC35F3Q8IY50 421 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 LILRB2Q8N423 598 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 Q8N9G6 341 aaPredicted RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 TP53I13Q8NBR0 393 aaPredicted RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 PLA2G15Q8NCC3 412 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 C3orf20Q8ND61 904 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 ADCY4Q8NFM4 1077 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 ASB12Q8WXK4 309 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 NTAN1Q96AB6 310 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 RAB7BQ96AH8 199 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 PRR11Q96HE9 360 aaPredicted RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 HIC2Q96JB3 615 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 VCPIP1Q96JH7 1222 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 GDAP1L1Q96MZ0 367 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 ZNF578Q96N58 590 aaPredicted RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 ERGIC2Q96RQ1 377 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 PEBP4Q96S96 227 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 LGMNQ99538 433 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 NCAPGQ9BPX3 1015 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 APOOQ9BUR5 198 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 LRRC61Q9BV99 259 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 BOCQ9BWV1 1114 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 CPEB1Q9BZB8 566 aaKnown RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 SLC13A1Q9BZW2 595 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 DHX35Q9H5Z1 703 aaKnown RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 CATSPERBQ9H7T0 1116 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 SYNDIG1Q9H7V2 258 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 POLR1BQ9H9Y6 1135 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 PCDH12Q9NPG4 1184 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 MRPL40Q9NQ50 206 aaKnown RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 TMEM51Q9NW97 253 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 STOML1Q9UBI4 398 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 SPASTQ9UBP0 616 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 APOBEC3BQ9UH17 382 aaKnown RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 LIMA1Q9UHB6 759 aaKnown RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 MOSPD1Q9UJG1 213 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 PADI4Q9UM07 663 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 TMA7Q9Y2S6 64 aaKnown RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 MFHAS1Q9Y4C4 1052 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 DAAM1Q9Y4D1 1078 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 ENTPD2Q9Y5L3 495 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 CSNK1G3Q9Y6M4 447 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 U3KQE9 123 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 ANKRD62A6NC57 917 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 ZSCAN5CA6NGD5 496 aaPredicted RBP4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 LGALS16A8MUM7 142 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 WASH4PA8MWX3 477 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 LMO7DNF2Z398 122 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 PYCARD-AS1I3L0S3 204 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 DFFAO00273 331 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 EEF2KO00418 725 aaKnown RBP4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 TPP1O14773 563 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 DAPK3O43293 454 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 CBFA2T2O43439 604 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 PRAMEF11O60813 436 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 TNFSF15O95150 251 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 RASGRP1O95267 797 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 IGSF6O95976 241 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 FTLP02792 175 aaPredicted RBP4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 FUCA1P04066 466 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 GP1BAP07359 652 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 C6P13671 934 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 HGFP14210 728 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms