RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 NUS1Q96E22 293 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 CFAP36Q96G28 342 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 TCF12Q99081 682 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 ORAI3Q9BRQ5 295 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 FAM167BQ9BTA0 163 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 PPCSQ9HAB8 311 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 BPIFA1Q9NP55 256 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 NSMCE4AQ9NXX6 385 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 MBD1Q9UIS9 605 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-206ENST00000454852 RABGEF1Q9UJ41 708 aa11.2□□□□□ -0.62
TRAF4-206ENST00000454852 TRPM6Q9BX84 2022 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 METTL12A8MUP2 240 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 ACSL3O95573 720 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 SOD1P00441 154 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 HOXC4P09017 264 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-206ENST00000454852 ITGALP20701 1170 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 TRIM23P36406 574 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 PXNP49023 591 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-206ENST00000454852 ADARP55265 1226 aaKnown RBP11.19□□□□□ -0.62
TRAF4-206ENST00000454852 SGCGQ13326 291 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 NFATC2Q13469 925 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 SLC29A2Q14542 456 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 STAT4Q14765 748 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 LRRC14Q15048 493 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 RASA2Q15283 850 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 WSCD2Q2TBF2 565 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 KLHL38Q2WGJ6 581 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 AARS2Q5JTZ9 985 aaKnown RBP11.19□□□□□ -0.62
TRAF4-206ENST00000454852 UBAP2Q5T6F2 1119 aaKnown RBP11.19□□□□□ -0.62
TRAF4-206ENST00000454852 TEDDM1Q5T9Z0 273 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 MRNIPQ6NTE8 343 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 FBXO38Q6PIJ6 1188 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 TSSK4Q6SA08 328 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 ADAMTSL4Q6UY14 1074 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 MARK2Q7KZI7 788 aaKnown RBP11.19□□□□□ -0.62
TRAF4-206ENST00000454852 IQCKQ8N0W5 287 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 TMEM145Q8NBT3 493 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 ZBTB44Q8NCP5 570 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 FAM174AQ8TBP5 190 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 ZNF398Q8TD17 642 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 FBF1Q8TES7 1133 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 GAB3Q8WWW8 586 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 RLN3Q8WXF3 142 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 CDKL2Q92772 493 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 SCAMP4Q969E2 229 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 ULK4Q96C45 1275 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 CYTH2Q99418 400 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 MCMBPQ9BTE3 642 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 TMEM109Q9BVC6 243 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 RIOK2Q9BVS4 552 aaKnown RBP11.19□□□□□ -0.62
TRAF4-206ENST00000454852 GPR174Q9BXC1 333 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 C1QTNF1Q9BXJ1 281 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 DUSP15Q9H1R2 295 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-206ENST00000454852 C6orf106Q9H6K1 298 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-206ENST00000454852 SUDS3Q9H7L9 328 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-206ENST00000454852 VPS37BQ9H9H4 285 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 ARFGAP3Q9NP61 516 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 CATSPERZQ9NTU4 200 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 C20orf96Q9NUD7 363 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-206ENST00000454852 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-206ENST00000454852 HS3ST3A1Q9Y663 406 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 SLC30A1Q9Y6M5 507 aa11.19□□□□□ -0.62
TRAF4-206ENST00000454852 NUMA1Q14980 2115 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 IGLV3-16A0A075B6K0 115 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 A0A1W2PPC4 97 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 CCDC78A2IDD5 438 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 CCL22O00626 93 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 CD3EAPO15446 510 aaKnown RBP11.18□□□□□ -0.62
TRAF4-206ENST00000454852 GALR2O43603 387 aaPredicted RBP11.18□□□□□ -0.62
TRAF4-206ENST00000454852 LILRB5O75023 590 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 PAK4O96013 591 aaPredicted RBP11.18□□□□□ -0.62
TRAF4-206ENST00000454852 SLC4A1P02730 911 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 HNRNPA2B1P22626 353 aaKnown RBP11.18□□□□□ -0.62
TRAF4-206ENST00000454852 LEPRP48357 1165 aaKnown RBP11.18□□□□□ -0.62
TRAF4-206ENST00000454852 FNTBP49356 437 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 TTPAP49638 278 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 TMPRSS15P98073 1019 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 CSTF1Q05048 431 aaKnown RBP11.18□□□□□ -0.62
TRAF4-206ENST00000454852 ITIH4Q14624 930 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 CHRNA6Q15825 494 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 KBTBD12Q3ZCT8 623 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 ATP13A5Q4VNC0 1218 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 FASTKD1Q53R41 847 aaKnown RBP11.18□□□□□ -0.62
TRAF4-206ENST00000454852 HSP90AA5PQ58FG0 334 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 TMEM31Q5JXX7 168 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 RNF187Q5TA31 235 aaPredicted RBP11.18□□□□□ -0.62
TRAF4-206ENST00000454852 LYPLAL1Q5VWZ2 237 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 PNCKQ6P2M8 343 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 FAM151BQ6UXP7 276 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 CILP2Q8IUL8 1156 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 UNC5BQ8IZJ1 945 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 NXPE1Q8N323 547 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 FAM160A2Q8N612 972 aaPredicted RBP11.18□□□□□ -0.62
TRAF4-206ENST00000454852 FRMD1Q8N878 549 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 C2CD4AQ8NCU7 369 aaPredicted RBP11.18□□□□□ -0.62
TRAF4-206ENST00000454852 DDHD1Q8NEL9 900 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 OR6P1Q8NGX9 317 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 HEXDCQ8WVB3 486 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 BTN2A2Q8WVV5 523 aa11.18□□□□□ -0.62
TRAF4-206ENST00000454852 DNASE2BQ8WZ79 361 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms