RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 SMG5Q9UPR3 1016 aaKnown RBP4.94□□□□□ -1.62
RIF1-207ENST00000454583 SLC17A4Q9Y2C5 497 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 AAR2Q9Y312 384 aaKnown RBP4.94□□□□□ -1.62
RIF1-207ENST00000454583 ZNF711Q9Y462 761 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 CCL27Q9Y4X3 112 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 HEY1Q9Y5J3 304 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 RAI2Q9Y5P3 530 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 STON1Q9Y6Q2 735 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 LOC400499M0QZD8 3231 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 TRPM6Q9BX84 2022 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 CCT8L1PA6NM43 557 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 K7ESM1 405 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 RAD51BO15315 384 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 GPR39O43194 453 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 WNT1P04628 370 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 NDUFV2P19404 249 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 ADRA1DP25100 572 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 ATP5DP30049 168 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 SLC1A2P43004 574 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 POLD2P49005 469 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 HK3P52790 923 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 KBTBD12Q3ZCT8 623 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 MARC1Q5VT66 337 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 HEATR6Q6AI08 1181 aaKnown RBP4.94□□□□□ -1.62
RIF1-207ENST00000454583 PNPLA1Q8N8W4 532 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 HMGCLL1Q8TB92 370 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 DNASE2BQ8WZ79 361 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 DLG3Q92796 817 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 FCRL1Q96LA6 429 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 MIPEPQ99797 713 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 SEMA3CQ99985 751 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 TRMT61BQ9BVS5 477 aaKnown RBP4.94□□□□□ -1.62
RIF1-207ENST00000454583 TRIM31Q9BZY9 425 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 TRPC7Q9HCX4 862 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 RBM22Q9NW64 420 aaKnown RBP eCLIP4.94□□□□□ -1.626e-10■■■□□ 16.4
RIF1-207ENST00000454583 SEMA5BQ9P283 1151 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 KLHL14Q9P2G3 628 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 MTRF1LQ9UGC7 380 aaKnown RBP4.94□□□□□ -1.62
RIF1-207ENST00000454583 LIMD1Q9UGP4 676 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 ZNF225Q9UK10 706 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 PHTF1Q9UMS5 762 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 SORCS3Q9UPU3 1222 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 CEP290O15078 2479 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 KCNE1BA0A087WTH5 132 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 IGHV1OR15-9A0A0B4J2B8 117 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 MAGEB16A2A368 324 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 FAM47DPA6NHR8 397 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.93□□□□□ -1.62
RIF1-207ENST00000454583 SCAMP3O14828 347 aaKnown RBP4.93□□□□□ -1.62
RIF1-207ENST00000454583 BIRC5O15392 142 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 MAP3K7O43318 606 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 WFS1O76024 890 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ZWINTO95229 277 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ACSL3O95573 720 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 PROCP04070 461 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ASGR2P07307 311 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ACRV1P26436 265 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 SLC8A1P32418 973 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ELF1P32519 619 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 GGT5P36269 586 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 AVPR1AP37288 418 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 SPINT3P49223 89 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 CDH17Q12864 832 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 GPS2Q13227 327 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 DLG2Q15700 870 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 FAXCQ5TGI0 409 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 Q6ZVU0 165 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 LSMEM2Q8N112 164 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 CPA6Q8N4T0 437 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ENDOVQ8N8Q3 282 aaKnown RBP4.93□□□□□ -1.62
RIF1-207ENST00000454583 TMEM105Q8N8V8 129 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 GSDMBQ8TAX9 411 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 PRR11Q96HE9 360 aaPredicted RBP4.93□□□□□ -1.62
RIF1-207ENST00000454583 BMFQ96LC9 184 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 PHOX2BQ99453 314 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 P2RY13Q9BPV8 354 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 BBS2Q9BXC9 721 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 LRMDAQ9H2I8 198 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 PLK2Q9NYY3 685 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 CELSR3Q9NYQ7 3312 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 SLC5A10A0PJK1 596 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 H3BMM5 538 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 GFYI3L273 518 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 PSMD3O43242 534 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 MOCS2O96007 188 aaPredicted RBP4.93□□□□□ -1.62
RIF1-207ENST00000454583 CKMP06732 381 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ADRB3P13945 408 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 OGNP20774 298 aaKnown RBP4.93□□□□□ -1.62
RIF1-207ENST00000454583 ADCY8P40145 1251 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 LIMK2P53671 638 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 SATB1Q01826 763 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 AP1B1Q10567 949 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 ELAVL3Q14576 367 aaKnown RBP4.93□□□□□ -1.62
RIF1-207ENST00000454583 GRM3Q14832 879 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 UGP2Q16851 508 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 INSCQ1MX18 579 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 KRT71Q3SY84 523 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 BRAT1Q6PJG6 821 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 WDR5BQ86VZ2 330 aa4.93□□□□□ -1.62
RIF1-207ENST00000454583 CAMK1DQ8IU85 385 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms