RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 CPSF6Q16630 551 aaKnown RBP eCLIP11.14□□□□□ -0.63
DDR1-239ENST00000452441 INSCQ1MX18 579 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 STXBP5Q5T5C0 1151 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 ATXN7L2Q5T6C5 722 aaPredicted RBP11.14□□□□□ -0.63
DDR1-239ENST00000452441 RIN3Q8TB24 985 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 KCTD13Q8WZ19 329 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 LRCH3Q96II8 777 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 TTPALQ9BTX7 342 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 TNKS2Q9H2K2 1166 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 ZDHHC7Q9NXF8 308 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 CRLS1Q9UJA2 301 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 VPS4AQ9UN37 437 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 CROCCQ5TZA2 2017 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 H3BSA7 217 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 MATN3O15232 486 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 PSMA4P25789 261 aaKnown RBP11.14□□□□□ -0.63
DDR1-239ENST00000452441 RAD51Q06609 339 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 DPYSQ14117 519 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 MAPRE2Q15555 327 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 ATP6AP1LQ52LC2 224 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 PIWIL4Q7Z3Z4 852 aaKnown RBP11.14□□□□□ -0.63
DDR1-239ENST00000452441 ANKRD46Q86W74 232 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 CPNE9Q8IYJ1 553 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 CBR4Q8N4T8 237 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 SIDT2Q8NBJ9 832 aaKnown RBP11.14□□□□□ -0.63
DDR1-239ENST00000452441 DRC3Q9H069 523 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 EXD2Q9NVH0 621 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 BAG5Q9UL15 447 aa11.14□□□□□ -0.63
DDR1-239ENST00000452441 OR1I1O60431 355 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 TOMM70O94826 608 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 HSPA14Q0VDF9 509 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 BOP1Q14137 746 aaKnown RBP11.13□□□□□ -0.63
DDR1-239ENST00000452441 C16orf72Q14CZ0 275 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 PGS1Q32NB8 556 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 BRMS1LQ5PSV4 323 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 HECTD3Q5T447 861 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 TMEM214Q6NUQ4 689 aaKnown RBP11.13□□□□□ -0.63
DDR1-239ENST00000452441 EGFL6Q8IUX8 553 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 FAM126BQ8IXS8 530 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 CENPLQ8N0S6 344 aaPredicted RBP11.13□□□□□ -0.63
DDR1-239ENST00000452441 ARL14EPQ8N8R7 260 aaPredicted RBP11.13□□□□□ -0.63
DDR1-239ENST00000452441 WWOXQ9NZC7 414 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 STK39Q9UEW8 545 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 ZFP37Q9Y6Q3 630 aaPredicted RBP11.13□□□□□ -0.63
DDR1-239ENST00000452441 PTPRFP10586 1907 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 TBL1XO60907 577 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 RNASEH2AO75792 299 aaKnown RBP11.13□□□□□ -0.63
DDR1-239ENST00000452441 FKBP9O95302 570 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 PYGLP06737 847 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 GALK1P51570 392 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 TLE2Q04725 743 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 PAFAH1B3Q15102 231 aaKnown RBP11.13□□□□□ -0.63
DDR1-239ENST00000452441 ANKS6Q68DC2 871 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 REP15Q6BDI9 236 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 UGT2A3Q6UWM9 527 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 RNF19BQ6ZMZ0 732 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 FKBP9P1Q75LS8 142 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 TMEM135Q86UB9 458 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 SLC44A2Q8IWA5 706 aaPredicted RBP11.13□□□□□ -0.63
DDR1-239ENST00000452441 RTL3Q8N8U3 475 aaKnown RBP11.13□□□□□ -0.63
DDR1-239ENST00000452441 IGSF8Q969P0 613 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 C19orf60Q96EN9 201 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 KCTD14Q9BQ13 255 aaPredicted RBP11.13□□□□□ -0.63
DDR1-239ENST00000452441 CCDC28BQ9BUN5 200 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 ZDHHC4Q9NPG8 344 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 TAS2R13Q9NYV9 303 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 KLQ9UEF7 1012 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 BPTFQ12830 3046 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 LOC285556D6RIA3 1793 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 H7C4K7 107 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 CLOCKO15516 846 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 SNAP91O60641 907 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 ABCB1P08183 1280 aaPredicted RBP11.13□□□□□ -0.63
DDR1-239ENST00000452441 UGT1A1P22309 533 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 UGT1A4P22310 534 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 CORO1AP31146 461 aaKnown RBP11.13□□□□□ -0.63
DDR1-239ENST00000452441 UGT1A3P35503 534 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 UGT1A5P35504 534 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 DGKQP52824 942 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 FOXA1P55317 472 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 GRB7Q14451 532 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 INPP5AQ14642 412 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 LAPTM4AQ15012 233 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 PNPT1Q8TCS8 783 aaKnown RBP11.13□□□□□ -0.63
DDR1-239ENST00000452441 MRPS31Q92665 395 aaKnown RBP11.13□□□□□ -0.63
DDR1-239ENST00000452441 SUSD3Q96L08 255 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 SLC9A7Q96T83 725 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 SPAG4Q9NPE6 437 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 VPS45Q9NRW7 570 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 UBAP1Q9NZ09 502 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 EIF2B4Q9UI10 523 aaKnown RBP11.13□□□□□ -0.63
DDR1-239ENST00000452441 RAD54BQ9Y620 910 aa11.13□□□□□ -0.63
DDR1-239ENST00000452441 SCAMP1O15126 338 aa11.12□□□□□ -0.63
DDR1-239ENST00000452441 OR4F21O95013 312 aa11.12□□□□□ -0.63
DDR1-239ENST00000452441 ZNF682O95780 498 aa11.12□□□□□ -0.63
DDR1-239ENST00000452441 NTRK1P04629 796 aa11.12□□□□□ -0.63
DDR1-239ENST00000452441 ALPIP09923 528 aa11.12□□□□□ -0.63
DDR1-239ENST00000452441 CDKN2DP55273 166 aa11.12□□□□□ -0.63
DDR1-239ENST00000452441 MTPNP58546 118 aa11.12□□□□□ -0.63
DDR1-239ENST00000452441 LSAMPQ13449 338 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms