RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 SOCS5O75159 536 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 KRT14P02533 472 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 CTSEP14091 401 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 CTPS1P17812 591 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 CES1P23141 567 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 HTR1BP28222 390 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 HK3P52790 923 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 SRP54P61011 504 aaKnown RBP17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 MTM1Q13496 603 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 GLE1Q53GS7 698 aaKnown RBP17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 ANKRD20A2Q5SQ80 823 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 FAM182AQ5T1J6 154 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 ANKRD20A1Q5TYW2 823 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 ANKRD20A3Q5VUR7 823 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 C8orf74Q6P047 294 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 ARHGEF18Q6ZSZ5 1173 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 EFL1Q7Z2Z2 1120 aaKnown RBP17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 FUBP1Q96AE4 644 aaKnown RBP17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 SPATA13Q96N96 652 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 SMIM14Q96QK8 99 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 SEMA3CQ99985 751 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 ABCG4Q9H172 646 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 KLQ9UEF7 1012 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 DOLKQ9UPQ8 538 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 TTLL3Q9Y4R7 772 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 ACACAQ13085 2346 aa17.02■□□□□ 0.31
PRPF40A-204ENST00000450303 ANKRD11Q6UB99 2663 aaPredicted RBP17.02■□□□□ 0.31
PRPF40A-204ENST00000450303 PKD1L2Q7Z442 2459 aa17.02■□□□□ 0.31
PRPF40A-204ENST00000450303 RP1P56715 2156 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 TMEM202A6NGA9 273 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 LMO7DNF2Z398 122 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 TPP1O14773 563 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 RASGRP1O95267 797 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 PDHA1P08559 390 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 VIPR1P32241 457 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 DSC2Q02487 901 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 WASHC5Q12768 1159 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 PRPSAP1Q14558 356 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 CNGA3Q16281 694 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 MAP9Q49MG5 647 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 ARMC12Q5T9G4 340 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 SLC35F3Q8IY50 421 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 ZNF567Q8N184 647 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 DCBLD1Q8N8Z6 715 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 MAPK15Q8TD08 544 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 HNRNPLLQ8WVV9 542 aaKnown RBP17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 NXPE2Q96DL1 559 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 TEKT5Q96M29 485 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 COQ10AQ96MF6 247 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 WDR92Q96MX6 357 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 AGAP3Q96P47 875 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 LGR4Q9BXB1 951 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 POLR1EQ9GZS1 481 aaKnown RBP17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 PCDH9Q9HC56 1237 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 MRPL40Q9NQ50 206 aaKnown RBP17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 EVA1BQ9NVM1 165 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 SIRPGQ9P1W8 387 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 GULP1Q9UBP9 304 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 DKK4Q9UBT3 224 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 PHTF1Q9UMS5 762 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 PCDHB1Q9Y5F3 818 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 RAI2Q9Y5P3 530 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 URB1O60287 2271 aaKnown RBP17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 ADAMTS20P59510 1910 aa17.01■□□□□ 0.31
PRPF40A-204ENST00000450303 CHD6Q8TD26 2715 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 A0A1W2PQ67 120 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 GOLGA6CA6NDK9 693 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 GOLGA6BA6NDN3 693 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 NPIPB15A6NHN6 443 aaPredicted RBP17■□□□□ 0.31
PRPF40A-204ENST00000450303 CACNB4O00305 520 aaPredicted RBP17■□□□□ 0.31
PRPF40A-204ENST00000450303 NDC80O14777 642 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 CASC3O15234 703 aaKnown RBP17■□□□□ 0.31
PRPF40A-204ENST00000450303 HEXIM1O94992 359 aaKnown RBP17■□□□□ 0.31
PRPF40A-204ENST00000450303 PGLSO95336 258 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 TNFP01375 233 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 ALPIP09923 528 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 GOLGA6DP0CG33 693 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 LHCGRP22888 699 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 FDFT1P37268 417 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 BLKP51451 505 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 GDF10P55107 478 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 ZBTB17Q13105 803 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 IHHQ14623 411 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 NR0B2Q15466 257 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 RALGPS1Q5JS13 557 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 PERM1Q5SV97 790 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 C6orf132Q5T0Z8 1188 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 PNCKQ6P2M8 343 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 HSD11B1LQ7Z5J1 315 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 TSPAN33Q86UF1 283 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 JAMLQ86YT9 394 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 KRT222Q8N1A0 295 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 CCDC110Q8TBZ0 833 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 OR1E3Q8WZA6 343 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 LRRC45Q96CN5 670 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 PDXPQ96GD0 296 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 TBATAQ96M53 351 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 BOCQ9BWV1 1114 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 RAB17Q9H0T7 212 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 GOLGA6AQ9NYA3 693 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms