RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 GPR63Q9BZJ6 419 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 ZFYVE1Q9HBF4 777 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 USP29Q9HBJ7 922 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 TRHDEQ9UKU6 1024 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 SPO11Q9Y5K1 396 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 ZNF106Q9H2Y7 1883 aaKnown RBP11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 ZFC3H1O60293 1989 aaKnown RBP11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 DSPP15924 2871 aaKnown RBP11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 TCRBV7S2A1N4TA0A589 114 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 CPED1A4D0V7 1026 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 FAM221BA6H8Z2 402 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 CEACAM5P06731 702 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 PYGLP06737 847 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 CDK4P11802 303 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 PSMB4P28070 264 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 POLD2P49005 469 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 KLF1Q13351 362 aaPredicted RBP11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 MPP3Q13368 585 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 SIRPB2Q5JXA9 342 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 CCNI2Q6ZMN8 369 aaPredicted RBP11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 TAF8Q7Z7C8 310 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 ARL10Q8N8L6 244 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 CCL4L1Q8NHW4 92 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 CCDC110Q8TBZ0 833 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 SCG3Q8WXD2 468 aaKnown RBP11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 GLMNQ92990 594 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 EID2BQ96D98 161 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 HIC2Q96JB3 615 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 SPATA13Q96N96 652 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 ALS2CR12Q96Q35 445 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 GORASP1Q9BQQ3 440 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 FICDQ9BVA6 458 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 TMEM168Q9H0V1 697 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 FAM83DQ9H4H8 585 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 MAGEE1Q9HCI5 957 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 NCKIPSDQ9NZQ3 722 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 GULP1Q9UBP9 304 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 SUFUQ9UMX1 484 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 GPR34Q9UPC5 381 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 SLC17A4Q9Y2C5 497 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 R3HDM2Q9Y2K5 976 aaKnown RBP11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 TMEM98Q9Y2Y6 226 aa11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 COL27A1Q8IZC6 1860 aaPredicted RBP11.87□□□□□ -0.51
LSP1P3-201ENST00000449530 DMXL2Q8TDJ6 3036 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 FADS2P1A8MWK0 482 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 B4DGG1 531 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 AURKAO14965 403 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 ANXA9O76027 345 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 RPIAP49247 311 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 GEMP55040 296 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 INSM1Q01101 510 aaPredicted RBP11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 ZNF569Q5MCW4 686 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 ANKRD20A2Q5SQ80 823 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 HENMT1Q5T8I9 393 aaKnown RBP11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 ANKRD20A1Q5TYW2 823 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 ANKRD20A3Q5VUR7 823 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 MARK2Q7KZI7 788 aaKnown RBP11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 TMPRSS12Q86WS5 348 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 RAVER1Q8IY67 606 aaKnown RBP11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 TTC13Q8NBP0 860 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 MAPK15Q8TD08 544 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 ATG4AQ8WYN0 398 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 ZCCHC14Q8WYQ9 949 aaKnown RBP11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 WDR24Q96S15 920 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 SPATA16Q9BXB7 569 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 SYNDIG1Q9H7V2 258 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 PPP2R2CQ9Y2T4 447 aa11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 GCN1Q92616 2671 aaKnown RBP11.86□□□□□ -0.51
LSP1P3-201ENST00000449530 LOC285095A0A1B0GVY8 99 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 RGSL1A5PLK6 1076 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 OPA1O60313 960 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 ASMTLO95671 621 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 FUCA1P04066 466 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 ATP1A1P05023 1023 aaKnown RBP11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 FGF1P05230 155 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 GP1BAP07359 652 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 IVLP07476 585 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 JUPP14923 745 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 HLA-DPA1P20036 260 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 DCDC1P59894 354 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 E2F1Q01094 437 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 ILF3Q12906 894 aaKnown RBP eCLIP11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 OLIG2Q13516 323 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 PRPSAP1Q14558 356 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 RPS6KA1Q15418 735 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 SLC1A5Q15758 541 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 PERM1Q5SV97 790 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 LVRNQ6Q4G3 990 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 ZNF662Q6ZS27 426 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 ARHGEF18Q6ZSZ5 1173 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 TMC3Q7Z5M5 1100 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 NLRP8Q86W28 1048 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 SFTPA2Q8IWL1 248 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 SDR16C5Q8N3Y7 309 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 FAM71DQ8N9W8 422 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 GPR26Q8NDV2 337 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 FAM46DQ8NEK8 389 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 BLOC1S5Q8TDH9 187 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 NAT6Q93015 286 aa11.85□□□□□ -0.51
LSP1P3-201ENST00000449530 COX14Q96I36 57 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms