RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 FUT11Q495W5 492 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 CARD16Q5EG05 197 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 ZRANB3Q5FWF4 1079 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 CFAP157Q5JU67 520 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 LY6G5CQ5SRR4 150 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 ZNF697Q5TEC3 545 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 PDE4DIPQ5VU43 2346 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 LYPLAL1Q5VWZ2 237 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 CES4AQ5XG92 561 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 UGT3A1Q6NUS8 523 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 PIWIL4Q7Z3Z4 852 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 KIAA0907Q7Z7F0 614 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 LDB1Q86U70 411 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 ADGRG2Q8IZP9 1017 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 WFIKKN2Q8TEU8 576 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 LPGAT1Q92604 370 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 INPP5DQ92835 1189 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 KLHL29Q96CT2 875 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 DOCK6Q96HP0 2047 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 RILPQ96NA2 401 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 LYSMD1Q96S90 227 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 GATA5Q9BWX5 397 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 C20orf27Q9GZN8 174 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 RASSF4Q9H2L5 321 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 ZFYVE1Q9HBF4 777 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 PRDM9Q9NQV7 894 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 RAP2CQ9Y3L5 183 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 PCDHB1Q9Y5F3 818 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 ZNF106Q9H2Y7 1883 aaKnown RBP10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 HGSO14964 777 aaPredicted RBP10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 VPS26AO75436 327 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 LYPLA1O75608 230 aaPredicted RBP10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 RHOBTB1O94844 696 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 WISP3O95389 354 aaPredicted RBP10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 ADH1CP00326 375 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 ESR1P03372 595 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 ASLP04424 464 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 SBK3P0C264 359 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 GMPRP36959 345 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 CDKN2DP55273 166 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 ATP6V0D1P61421 351 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 NCALDP61601 193 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 POLR2LP62875 67 aaKnown RBP10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 PFKPQ01813 784 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 DLG1Q12959 904 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 KRT72Q14CN4 511 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 SPRED3Q2MJR0 410 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 ACCSLQ4AC99 568 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 DGKKQ5KSL6 1271 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 C9orf50Q5SZB4 431 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 ZDHHC20Q5W0Z9 365 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 ZNF549Q6P9A3 640 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 USP45Q70EL2 814 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 RBM23Q86U06 439 aaKnown RBP10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 CBARPQ8N350 705 aaPredicted RBP10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 AFAP1L2Q8N4X5 818 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 NKAPQ8N5F7 415 aaKnown RBP10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 RHEBL1Q8TAI7 183 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 STON2Q8WXE9 905 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 CNDP1Q96KN2 507 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 RPL10LQ96L21 214 aaKnown RBP10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 RAB3IPQ96QF0 476 aaPredicted RBP10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 SORT1Q99523 831 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 CDH19Q9H159 772 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 TNKS2Q9H2K2 1166 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 SUV39H2Q9H5I1 410 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 VTI1BQ9UEU0 232 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 MARCOQ9UEW3 520 aaPredicted RBP10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 PPIL1Q9Y3C6 166 aa10.53□□□□□ -0.72
VIPAS39-203ENST00000448935 C1orf232A0A0U1RR37 186 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 GRXCR1A8MXD5 290 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 WASH3PC4AMC7 463 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 DLX3O60479 287 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 ICMTO60725 284 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 SMIM24O75264 130 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 ZNF821O75541 412 aaPredicted RBP10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 IPO13O94829 963 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 PIGNO95427 931 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 SERPINA6P08185 405 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 PKMP14618 531 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 ZNF37AP17032 561 aaPredicted RBP10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 CTPS1P17812 591 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 TFEBP19484 476 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 ITGALP20701 1170 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 CCNHP51946 323 aaPredicted RBP10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 NAGLUP54802 743 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 NAA20P61599 178 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 PEX6Q13608 980 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 SHHQ15465 462 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 RAB30Q15771 203 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 GPR33Q49SQ1 333 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 GRAMD4Q6IC98 578 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 TPRG1Q6ZUI0 275 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 LYSMD3Q7Z3D4 306 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 SPRED2Q7Z698 418 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 OR6K2Q8NGY2 324 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 RIN3Q8TB24 985 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 OSCP1Q8WVF1 389 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms