RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 RBL1P28749 1068 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 HMOX2P30519 316 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 GJA4P35212 333 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 ACVRL1P37023 503 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 NDST2P52849 883 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 NUP107P57740 925 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 CCNG2Q16589 344 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 OTUD1Q5VV17 481 aaPredicted RBP5.94□□□□□ -1.46
PROM1-201ENST00000447510 GPR141Q7Z602 305 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 LRRC49Q8IUZ0 686 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 CPXM2Q8N436 756 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 SLC44A3Q8N4M1 653 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.94□□□□□ -1.46
PROM1-201ENST00000447510 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.94□□□□□ -1.46
PROM1-201ENST00000447510 DENND1AQ8TEH3 1009 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 HTR3CQ8WXA8 447 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 EBF4Q9BQW3 602 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 PLA2G2FQ9BZM2 168 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 C8orf33Q9H7E9 229 aaPredicted RBP5.94□□□□□ -1.46
PROM1-201ENST00000447510 PCDH12Q9NPG4 1184 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 DNPEPQ9ULA0 475 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 FNDC3AQ9Y2H6 1198 aaKnown RBP5.94□□□□□ -1.46
PROM1-201ENST00000447510 A0A0D9SEW6 157 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 PRPF4O43172 522 aaKnown RBP eCLIP5.94□□□□□ -1.46
PROM1-201ENST00000447510 BUD23O43709 281 aaKnown RBP5.94□□□□□ -1.46
PROM1-201ENST00000447510 CNOT3O75175 753 aaKnown RBP5.94□□□□□ -1.46
PROM1-201ENST00000447510 IGSF6O95976 241 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 IGLV3-25P01717 112 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 SMIM18P0DKX4 95 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 CDH2P19022 906 aaPredicted RBP5.94□□□□□ -1.46
PROM1-201ENST00000447510 MZF1P28698 734 aaPredicted RBP5.94□□□□□ -1.46
PROM1-201ENST00000447510 STIP1P31948 543 aaKnown RBP5.94□□□□□ -1.46
PROM1-201ENST00000447510 PPARGP37231 505 aaPredicted RBP5.94□□□□□ -1.46
PROM1-201ENST00000447510 RAP1GDS1P52306 607 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 PKNOX1P55347 436 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 BST1Q10588 318 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 LMAN2Q12907 356 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 PON2Q15165 354 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 MAPK11Q15759 364 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 HIF1AQ16665 826 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 CCDC153Q494R4 210 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 AHI1Q8N157 1196 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 ZNF786Q8N393 782 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 SKA1Q96BD8 255 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 FRMD8P1Q9BZ68 369 aaPredicted RBP5.94□□□□□ -1.46
PROM1-201ENST00000447510 MRPL46Q9H2W6 279 aaKnown RBP5.94□□□□□ -1.46
PROM1-201ENST00000447510 SCUBE2Q9NQ36 999 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 RAB6BQ9NRW1 208 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 TMEM248Q9NWD8 314 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 BCAP29Q9UHQ4 241 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 ITGB1BP2Q9UKP3 347 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 MFHAS1Q9Y4C4 1052 aa5.94□□□□□ -1.46
PROM1-201ENST00000447510 GOLGA8TH3BQL2 631 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 RNF103O00237 685 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 KPNA3O00505 521 aaPredicted RBP5.93□□□□□ -1.46
PROM1-201ENST00000447510 MAN2B1O00754 1011 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 ENO3P13929 434 aaPredicted RBP5.93□□□□□ -1.46
PROM1-201ENST00000447510 RPL10P27635 214 aaKnown RBP5.93□□□□□ -1.46
PROM1-201ENST00000447510 ECT2LQ008S8 904 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 TRAF2Q12933 501 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 BNIP3Q12983 259 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 HTR4Q13639 388 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 BMPR2Q13873 1038 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 KCNC3Q14003 757 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 CYP2A13Q16696 494 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 EML3Q32P44 896 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 PLEKHG6Q3KR16 790 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 PITRM1Q5JRX3 1037 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 FAXCQ5TGI0 409 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 GPR107Q5VW38 600 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 ZNF852Q6ZMS4 543 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 ADHFE1Q8IWW8 467 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 ZNF366Q8N895 744 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 GLIS1Q8NBF1 620 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 IPMKQ8NFU5 416 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 GRIN3AQ8TCU5 1115 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 FAM3CQ92520 227 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 ACDQ96AP0 544 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 TMEM79Q9BSE2 394 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 SLC2A11Q9BYW1 496 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 TPK1Q9H3S4 243 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 UBP1Q9NZI7 540 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 DTLQ9NZJ0 730 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 SORCS3Q9UPU3 1222 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 FAM32AQ9Y421 112 aaKnown RBP5.93□□□□□ -1.46
PROM1-201ENST00000447510 PRR23AA6NEV1 266 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 C3orf70A6NLC5 250 aaPredicted RBP5.93□□□□□ -1.46
PROM1-201ENST00000447510 HACD1B0YJ81 288 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 TMX2-CTNND1H3BSU7 103 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 ITM2AO43736 263 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 UGT1A9O60656 530 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 THRAP10827 490 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 ACADMP11310 421 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 UGT1A6P19224 532 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 UGT1A1P22309 533 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 UGT1A4P22310 534 aa5.93□□□□□ -1.46
PROM1-201ENST00000447510 EEF1B2P24534 225 aaKnown RBP5.93□□□□□ -1.46
PROM1-201ENST00000447510 MAP4P27816 1152 aaKnown RBP5.93□□□□□ -1.46
PROM1-201ENST00000447510 EEF1DP29692 281 aaKnown RBP5.93□□□□□ -1.46
PROM1-201ENST00000447510 CD70P32970 193 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms