RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 ARFGAP3Q9NP61 516 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 RAB6BQ9NRW1 208 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 HACD3Q9P035 362 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 SPASTQ9UBP0 616 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 ZKSCAN5Q9Y2L8 839 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 TMEM98Q9Y2Y6 226 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 ARL5AQ9Y689 179 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 PRSS38A1L453 326 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 TRIM38O00635 465 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 GPR39O43194 453 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 SIGLEC6O43699 453 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 ASMTLO95671 621 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 LDOC1O95751 146 aaPredicted RBP11.85□□□□□ -0.51
RFC4-208ENST00000447345 AP2A1O95782 977 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 TNFP01375 233 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 MYF5P13349 255 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 TPH1P17752 444 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 RPL22P35268 128 aaKnown RBP11.85□□□□□ -0.51
RFC4-208ENST00000447345 GNPDA1P46926 289 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 VPS41P49754 854 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 BLKP51451 505 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 HK3P52790 923 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 DNAJC3Q13217 504 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 SEPT6Q14141 434 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 HS1BP3Q53T59 392 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 ZNF648Q5T619 568 aaPredicted RBP11.85□□□□□ -0.51
RFC4-208ENST00000447345 KCTD11Q693B1 232 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 TTC27Q6P3X3 843 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 FAM151BQ6UXP7 276 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 RANBP10Q6VN20 620 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 BTN2A2Q8WVV5 523 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 MAGOHBQ96A72 148 aaKnown RBP11.85□□□□□ -0.51
RFC4-208ENST00000447345 HIC2Q96JB3 615 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 SRPK1Q96SB4 655 aaKnown RBP11.85□□□□□ -0.51
RFC4-208ENST00000447345 CDC6Q99741 560 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 NAPGQ99747 312 aaPredicted RBP11.85□□□□□ -0.51
RFC4-208ENST00000447345 CLPBQ9H078 707 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 TRABDQ9H4I3 376 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 CARS2Q9HA77 564 aaKnown RBP11.85□□□□□ -0.51
RFC4-208ENST00000447345 ETNK1Q9HBU6 452 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 PAK5Q9P286 719 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 DOLKQ9UPQ8 538 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 NCOR2Q9Y618 2525 aa11.85□□□□□ -0.51
RFC4-208ENST00000447345 CCDC78A2IDD5 438 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 RGSL1A5PLK6 1076 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 NEMP2A6NFY4 417 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 PDE2AO00408 941 aaPredicted RBP11.84□□□□□ -0.51
RFC4-208ENST00000447345 CEACAM5P06731 702 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 PYGLP06737 847 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 APRTP07741 180 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 HOXC4P09017 264 aaPredicted RBP11.84□□□□□ -0.51
RFC4-208ENST00000447345 FTH1P19P0C7X4 201 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 GIMD1P0DJR0 217 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 ALPPL2P10696 532 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 TCP1P17987 556 aaKnown RBP11.84□□□□□ -0.51
RFC4-208ENST00000447345 TEAD1P28347 426 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 HMGCLP35914 325 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 FDFT1P37268 417 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 SPAM1P38567 509 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 DCDC1P59894 354 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 BASP1P80723 227 aaKnown RBP11.84□□□□□ -0.51
RFC4-208ENST00000447345 TMPRSS15P98073 1019 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 DAB2P98082 770 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 FOXC1Q12948 553 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 POU6F1Q14863 301 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 DENND5AQ6IQ26 1287 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 DRICH1Q6PGQ1 229 aaPredicted RBP11.84□□□□□ -0.51
RFC4-208ENST00000447345 PPP1R21Q6ZMI0 780 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 KLHDC8BQ8IXV7 354 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 PNPLA1Q8N8W4 532 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 OR52K1Q8NGK4 314 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 OR4C6Q8NH72 309 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 NAP1L3Q99457 506 aaPredicted RBP11.84□□□□□ -0.51
RFC4-208ENST00000447345 FRMD8Q9BZ67 464 aaPredicted RBP11.84□□□□□ -0.51
RFC4-208ENST00000447345 TMEM168Q9H0V1 697 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 RAD18Q9NS91 495 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 HOMER3Q9NSC5 361 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 NLGN3Q9NZ94 848 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.84□□□□□ -0.51
RFC4-208ENST00000447345 SIRPGQ9P1W8 387 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 TTC7AQ9ULT0 858 aaPredicted RBP11.84□□□□□ -0.51
RFC4-208ENST00000447345 SUFUQ9UMX1 484 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 PKP3Q9Y446 797 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 KCTD3Q9Y597 815 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 OAS3Q9Y6K5 1087 aaKnown RBP11.84□□□□□ -0.51
RFC4-208ENST00000447345 RP1P56715 2156 aa11.84□□□□□ -0.51
RFC4-208ENST00000447345 PIKFYVEQ9Y2I7 2098 aa11.83□□□□□ -0.51
RFC4-208ENST00000447345 GOLGA6L10A0A0M3HER8 536 aa11.83□□□□□ -0.52
RFC4-208ENST00000447345 CTAGE9A4FU28 777 aa11.83□□□□□ -0.52
RFC4-208ENST00000447345 CCL22O00626 93 aa11.83□□□□□ -0.52
RFC4-208ENST00000447345 FANCGO15287 622 aa11.83□□□□□ -0.52
RFC4-208ENST00000447345 STX7O15400 261 aaKnown RBP11.83□□□□□ -0.52
RFC4-208ENST00000447345 PSMD3O43242 534 aa11.83□□□□□ -0.52
RFC4-208ENST00000447345 TNFSF14O43557 240 aa11.83□□□□□ -0.52
RFC4-208ENST00000447345 PHF2O75151 1096 aa11.83□□□□□ -0.52
RFC4-208ENST00000447345 MTX2O75431 263 aa11.83□□□□□ -0.52
RFC4-208ENST00000447345 FUCA1P04066 466 aa11.83□□□□□ -0.52
RFC4-208ENST00000447345 ANXA6P08133 673 aa11.83□□□□□ -0.52
RFC4-208ENST00000447345 LPOP22079 712 aaPredicted RBP11.83□□□□□ -0.52
RFC4-208ENST00000447345 SEMA5AQ13591 1074 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms