RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 PLEKHO1Q53GL0 409 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 DCAF12L2Q5VW00 463 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 TXNDC8Q6A555 127 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 AWAT2Q6E213 333 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 CAVIN1Q6NZI2 390 aaKnown RBP4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 TATDN1Q6P1N9 297 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 IYDQ6PHW0 289 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 Q6ZSV7 163 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 PIWIL3Q7Z3Z3 882 aaKnown RBP4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 CTU1Q7Z7A3 348 aaKnown RBP4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 SDCCAG8Q86SQ7 713 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 MINDY1Q8N5J2 469 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 SPC24Q8NBT2 197 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 RASSF8Q8NHQ8 419 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 MRPS27Q92552 414 aaKnown RBP4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 SNAPC3Q92966 411 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 TMEM18Q96B42 140 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 PAFAH2Q99487 392 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 NAA11Q9BSU3 229 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 XPO4Q9C0E2 1151 aaKnown RBP4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 FAM234AQ9H0X4 552 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 COPS7BQ9H9Q2 264 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 PLAC1Q9HBJ0 212 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 A0A0U1RQF3 1178 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 A0A0U1RQK1 487 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 ZNF320A2RRD8 509 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 USP17L23D6RBM5 183 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 H0YAE9 185 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 RTCAO00442 366 aaKnown RBP4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 ADAMDEC1O15204 470 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 WDR46O15213 610 aaKnown RBP4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 PAPSS1O43252 624 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 SLC25A17O43808 307 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 HS6ST1O60243 411 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 NDUFS3O75489 264 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 TPPPO94811 219 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 SOX30O94993 753 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 SYF2O95926 243 aaKnown RBP4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 FTCDO95954 541 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 FDPSP14324 419 aaKnown RBP4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 SRD5A1P18405 259 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 EDN2P20800 178 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 GABRB2P47870 512 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 RFX2P48378 723 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 MRPS5P82675 430 aaKnown RBP4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 PPATQ06203 517 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 IKQ13123 557 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 LPIN1Q14693 890 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 RNPS1Q15287 305 aaKnown RBP4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 ALG11Q2TAA5 492 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 EDRF1Q3B7T1 1238 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 TTC31Q49AM3 519 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 KRTCAP3Q53RY4 240 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 SUSD1Q6UWL2 747 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 CLEC17AQ6ZS10 378 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 TRILQ7L0X0 811 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 GPAT4Q86UL3 456 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 DENND6AQ8IWF6 608 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 Q8N9P0 234 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 SETD6Q8TBK2 473 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 GRK7Q8WTQ7 553 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 SLC35F5Q8WV83 523 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 RNF183Q96D59 192 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 ELMOD3Q96FG2 381 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 CCDC43Q96MW1 224 aaKnown RBP4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 SPAG5Q96R06 1193 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 KIFC3Q9BVG8 833 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 CCDC106Q9BWC9 280 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 NPFFR1Q9GZQ6 430 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 LHPPQ9H008 270 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 OSGEPL1Q9H4B0 414 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 PLK3Q9H4B4 646 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 KIF9Q9HAQ2 790 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 ASAH2Q9NR71 780 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 SLC6A13Q9NSD5 602 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 COQ3Q9NZJ6 369 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 DNAJB9Q9UBS3 223 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 PA2G4Q9UQ80 394 aaKnown RBP4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 POMT1Q9Y6A1 747 aa4.52□□□□□ -1.69
HMGB1P48-201ENST00000446155 LOC100509620A0A075B734 347 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 TRAV34A0A0B4J273 112 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 TCRBV21S2A2A0A5A6 115 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 HSPB2A8KAH6 182 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 BECN2A8MW95 431 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 RGS14O43566 566 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 HCRTR2O43614 444 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 SYNCRIPO60506 623 aaKnown RBP4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 DIAPH2O60879 1101 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 MITFO75030 526 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 IGKV2-30P06310 120 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 SRPRAP08240 638 aaKnown RBP4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 TMEM11P17152 192 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 TRIM21P19474 475 aaKnown RBP4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 PON1P27169 355 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 CDAP32320 146 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 TCF7P36402 384 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 POLGP54098 1239 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 PNLIPRP2P54317 469 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 GALCP54803 685 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 YWHAZP63104 245 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms