RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 MGARPQ8TDB4 240 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 GATA6Q92908 595 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 ZNF641Q96N77 438 aaPredicted RBP8.07□□□□□ -1.12
CCDC39-201ENST00000442201 SMIM14Q96QK8 99 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 SRPK1Q96SB4 655 aaKnown RBP8.07□□□□□ -1.12
CCDC39-201ENST00000442201 GAS2L1Q99501 681 aaPredicted RBP8.07□□□□□ -1.12
CCDC39-201ENST00000442201 MFSD1Q9H3U5 465 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 SUV39H2Q9H5I1 410 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 MAGEE1Q9HCI5 957 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 GGT7Q9UJ14 662 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 CD207Q9UJ71 328 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 FBXO5Q9UKT4 447 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 COLQQ9Y215 455 aaPredicted RBP8.07□□□□□ -1.12
CCDC39-201ENST00000442201 USP15Q9Y4E8 981 aaPredicted RBP8.07□□□□□ -1.12
CCDC39-201ENST00000442201 A0A1W2PQ67 120 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 TTC34A8MYJ7 566 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 CCL22O00626 93 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 AURKAO14965 403 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 RFPL1O75677 317 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 HNRNPCP07910 306 aaKnown RBP eCLIP8.07□□□□□ -1.12
CCDC39-201ENST00000442201 CTPS1P17812 591 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 CALB2P22676 271 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 GJA4P35212 333 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 ZNF140P52738 457 aaPredicted RBP8.07□□□□□ -1.12
CCDC39-201ENST00000442201 SLC18A2Q05940 514 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 CTBP1Q13363 440 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 MAP7Q14244 749 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 SEPT7Q16181 437 aaKnown RBP8.07□□□□□ -1.12
CCDC39-201ENST00000442201 CCDC153Q494R4 210 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 PTAR1Q7Z6K3 402 aaPredicted RBP8.07□□□□□ -1.12
CCDC39-201ENST00000442201 DENND6AQ8IWF6 608 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 BANPQ8N9N5 519 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 TERB1Q8NA31 727 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 OR4K2Q8NGD2 314 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 TTC8Q8TAM2 541 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 FRS2Q8WU20 508 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 ATXN7L3BQ96GX2 97 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 VPS39Q96JC1 886 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 HEPHQ9BQS7 1158 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 GPR63Q9BZJ6 419 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 RHOJQ9H4E5 214 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 NLE1Q9NVX2 485 aaPredicted RBP8.07□□□□□ -1.12
CCDC39-201ENST00000442201 LRCH1Q9Y2L9 728 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 SLC30A1Q9Y6M5 507 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 A0A0J9YYE9 177 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 TBC1D3BA6NDS4 549 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.07□□□□□ -1.12
CCDC39-201ENST00000442201 WASH3PC4AMC7 463 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 PRRT4C9JH25 899 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 COPEO14579 308 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 STX7O15400 261 aaKnown RBP8.07□□□□□ -1.12
CCDC39-201ENST00000442201 ZWINTO95229 277 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 TRBC1P01850 177 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 AHSGP02765 367 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 UGT2B4P06133 528 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 EIF2DP41214 584 aaKnown RBP8.07□□□□□ -1.12
CCDC39-201ENST00000442201 SLC1A2P43004 574 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 MESP2Q0VG99 397 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 PTPRCAPQ14761 206 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 LRRC14Q15048 493 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 PTPRNQ16849 979 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 ITPRIPL2Q3MIP1 535 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 FSTL4Q6MZW2 842 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 MRNIPQ6NTE8 343 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 SH2D5Q6ZV89 423 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 BPHLQ86WA6 291 aaPredicted RBP8.07□□□□□ -1.12
CCDC39-201ENST00000442201 SCUBE1Q8IWY4 988 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 CHST14Q8NCH0 376 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 C2CD4AQ8NCU7 369 aaPredicted RBP8.07□□□□□ -1.12
CCDC39-201ENST00000442201 ACMSDQ8TDX5 336 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 UCMAQ8WVF2 138 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 CDKN2AIPNLQ96HQ2 116 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 APOPT1Q96IL0 206 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 HIC2Q96JB3 615 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 FAM161BQ96MY7 647 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 RPP25Q9BUL9 199 aaKnown RBP8.07□□□□□ -1.12
CCDC39-201ENST00000442201 RNPEPL1Q9HAU8 725 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 EPS15L1Q9UBC2 864 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 PHTF1Q9UMS5 762 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 ZNF711Q9Y462 761 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 H3BQ06 376 aaPredicted RBP8.06□□□□□ -1.12
CCDC39-201ENST00000442201 ALPIP09923 528 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 TYK2P29597 1187 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 RPA3P35244 121 aaPredicted RBP8.06□□□□□ -1.12
CCDC39-201ENST00000442201 HADHAP40939 763 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 OPRD1P41143 372 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 GDPD4Q6W3E5 623 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 NUDT18Q6ZVK8 323 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 ZC3HC1Q86WB0 502 aaKnown RBP8.06□□□□□ -1.12
CCDC39-201ENST00000442201 TTC30BQ8N4P2 665 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 DCLK2Q8N568 766 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 ANKS4BQ8N8V4 417 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 KDM1BQ8NB78 822 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 GRIN3AQ8TCU5 1115 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 SUSD6Q92537 303 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 SPOCK2Q92563 424 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 NXPE3Q969Y0 559 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 ECHDC3Q96DC8 303 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 BRD9Q9H8M2 597 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 MLXIPLQ9NP71 852 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms