RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 SPTA1P02549 2419 aa20.64■□□□□ 0.89
CPNE1-219ENST00000440240 SCN8AQ9UQD0 1980 aa20.63■□□□□ 0.89
CPNE1-219ENST00000440240 A0A0U1RQS6 177 aa20.63■□□□□ 0.89
CPNE1-219ENST00000440240 CCL4P13236 92 aa20.63■□□□□ 0.89
CPNE1-219ENST00000440240 PBX1P40424 430 aa20.63■□□□□ 0.89
CPNE1-219ENST00000440240 DPYSL3Q14195 570 aa20.63■□□□□ 0.89
CPNE1-219ENST00000440240 PDK2Q15119 407 aa20.63■□□□□ 0.89
CPNE1-219ENST00000440240 NCBP2-AS2Q69YL0 99 aa20.63■□□□□ 0.89
CPNE1-219ENST00000440240 RFLNAQ6ZTI6 216 aa20.63■□□□□ 0.89
CPNE1-219ENST00000440240 GALNT13Q8IUC8 556 aa20.63■□□□□ 0.89
CPNE1-219ENST00000440240 AGBL5Q8NDL9 886 aa20.63■□□□□ 0.89
CPNE1-219ENST00000440240 CCDC112Q8NEF3 446 aa20.63■□□□□ 0.89
CPNE1-219ENST00000440240 ZNF670Q9BS34 389 aa20.63■□□□□ 0.89
CPNE1-219ENST00000440240 FUCA2Q9BTY2 467 aa20.63■□□□□ 0.89
CPNE1-219ENST00000440240 KCNK4Q9NYG8 393 aa20.63■□□□□ 0.89
CPNE1-219ENST00000440240 CHKBQ9Y259 395 aa20.63■□□□□ 0.89
CPNE1-219ENST00000440240 PCDHGA3Q9Y5H0 932 aa20.63■□□□□ 0.89
CPNE1-219ENST00000440240 TENM4Q6N022 2769 aa20.63■□□□□ 0.89
CPNE1-219ENST00000440240 IGHV1OR21-1A0A087WYE8 117 aa20.62■□□□□ 0.89
CPNE1-219ENST00000440240 STMND1H3BQB6 276 aa20.62■□□□□ 0.89
CPNE1-219ENST00000440240 MFSD11O43934 449 aa20.62■□□□□ 0.89
CPNE1-219ENST00000440240 SFTPCP11686 197 aa20.62■□□□□ 0.89
CPNE1-219ENST00000440240 MX2P20592 715 aa20.62■□□□□ 0.89
CPNE1-219ENST00000440240 STC1P52823 247 aa20.62■□□□□ 0.89
CPNE1-219ENST00000440240 GPLD1P80108 840 aa20.62■□□□□ 0.89
CPNE1-219ENST00000440240 DSC2Q02487 901 aa20.62■□□□□ 0.89
CPNE1-219ENST00000440240 SRSF6Q13247 344 aaKnown RBP20.62■□□□□ 0.89
CPNE1-219ENST00000440240 LINC00303Q3SY05 128 aa20.62■□□□□ 0.89
CPNE1-219ENST00000440240 ANKRD20A8PQ5CZ79 823 aa20.62■□□□□ 0.89
CPNE1-219ENST00000440240 MARK2Q7KZI7 788 aaKnown RBP20.62■□□□□ 0.89
CPNE1-219ENST00000440240 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.62■□□□□ 0.89
CPNE1-219ENST00000440240 EXD3Q8N9H8 876 aa20.62■□□□□ 0.89
CPNE1-219ENST00000440240 RCBTB1Q8NDN9 531 aa20.62■□□□□ 0.89
CPNE1-219ENST00000440240 ZNF564Q8TBZ8 553 aaPredicted RBP20.62■□□□□ 0.89
CPNE1-219ENST00000440240 COX14Q96I36 57 aa20.62■□□□□ 0.89
CPNE1-219ENST00000440240 CCDC74BQ96LY2 380 aa20.62■□□□□ 0.89
CPNE1-219ENST00000440240 RIOK2Q9BVS4 552 aaKnown RBP20.62■□□□□ 0.89
CPNE1-219ENST00000440240 TDRD1Q9BXT4 1180 aaKnown RBP20.62■□□□□ 0.89
CPNE1-219ENST00000440240 LCMT1Q9UIC8 334 aa20.62■□□□□ 0.89
CPNE1-219ENST00000440240 PLEKHM1Q9Y4G2 1056 aa20.62■□□□□ 0.89
CPNE1-219ENST00000440240 TTLL3Q9Y4R7 772 aa20.62■□□□□ 0.89
CPNE1-219ENST00000440240 PCDHGA4Q9Y5G9 962 aa20.62■□□□□ 0.89
CPNE1-219ENST00000440240 ASMTLO95671 621 aa20.61■□□□□ 0.89
CPNE1-219ENST00000440240 KRT7P08729 469 aa20.61■□□□□ 0.89
CPNE1-219ENST00000440240 FGF3P11487 239 aaPredicted RBP20.61■□□□□ 0.89
CPNE1-219ENST00000440240 CSTF2P33240 577 aaKnown RBP eCLIP20.61■□□□□ 0.892e-45■■■■■ 66.1
CPNE1-219ENST00000440240 FASLGP48023 281 aa20.61■□□□□ 0.89
CPNE1-219ENST00000440240 ATP13A4Q4VNC1 1196 aa20.61■□□□□ 0.89
CPNE1-219ENST00000440240 NKAIN2Q5VXU1 208 aa20.61■□□□□ 0.89
CPNE1-219ENST00000440240 TMEM71Q6P5X7 295 aa20.61■□□□□ 0.89
CPNE1-219ENST00000440240 VASH2Q86V25 355 aa20.61■□□□□ 0.89
CPNE1-219ENST00000440240 ARRDC2Q8TBH0 407 aa20.61■□□□□ 0.89
CPNE1-219ENST00000440240 EXTL1Q92935 676 aa20.61■□□□□ 0.89
CPNE1-219ENST00000440240 SMIM14Q96QK8 99 aa20.61■□□□□ 0.89
CPNE1-219ENST00000440240 LYSMD1Q96S90 227 aa20.61■□□□□ 0.89
CPNE1-219ENST00000440240 AGAP2Q99490 1192 aa20.61■□□□□ 0.89
CPNE1-219ENST00000440240 CBX8Q9HC52 389 aa20.61■□□□□ 0.89
CPNE1-219ENST00000440240 PCDH9Q9HC56 1237 aa20.61■□□□□ 0.89
CPNE1-219ENST00000440240 VPS18Q9P253 973 aa20.61■□□□□ 0.89
CPNE1-219ENST00000440240 ZNHIT2Q9UHR6 403 aa20.61■□□□□ 0.89
CPNE1-219ENST00000440240 PROSCO94903 275 aa20.6■□□□□ 0.89
CPNE1-219ENST00000440240 CLDN7O95471 211 aa20.6■□□□□ 0.89
CPNE1-219ENST00000440240 PRLP01236 227 aa20.6■□□□□ 0.89
CPNE1-219ENST00000440240 IHHQ14623 411 aa20.6■□□□□ 0.89
CPNE1-219ENST00000440240 TRIM74Q86UV6 250 aa20.6■□□□□ 0.89
CPNE1-219ENST00000440240 LUZP1Q86V48 1076 aa20.6■□□□□ 0.89
CPNE1-219ENST00000440240 SFRP1Q8N474 314 aa20.6■□□□□ 0.89
CPNE1-219ENST00000440240 AHCYL2Q96HN2 611 aaKnown RBP20.6■□□□□ 0.89
CPNE1-219ENST00000440240 SLC38A3Q99624 504 aa20.6■□□□□ 0.89
CPNE1-219ENST00000440240 ASPSCR1Q9BZE9 553 aa20.6■□□□□ 0.89
CPNE1-219ENST00000440240 FAM117AQ9C073 453 aa20.6■□□□□ 0.89
CPNE1-219ENST00000440240 CTTNBP2NLQ9P2B4 639 aa20.6■□□□□ 0.89
CPNE1-219ENST00000440240 UVRAGQ9P2Y5 699 aa20.6■□□□□ 0.89
CPNE1-219ENST00000440240 RGSL1A5PLK6 1076 aa20.59■□□□□ 0.89
CPNE1-219ENST00000440240 INPP4BO15327 924 aa20.59■□□□□ 0.89
CPNE1-219ENST00000440240 SLC28A2O43868 658 aa20.59■□□□□ 0.89
CPNE1-219ENST00000440240 MAP3K6O95382 1288 aa20.59■□□□□ 0.89
CPNE1-219ENST00000440240 THRAP10827 490 aa20.59■□□□□ 0.89
CPNE1-219ENST00000440240 GJC1P36383 396 aa20.59■□□□□ 0.89
CPNE1-219ENST00000440240 ATP1A2P50993 1020 aa20.59■□□□□ 0.89
CPNE1-219ENST00000440240 CCNYQ8ND76 341 aa20.59■□□□□ 0.89
CPNE1-219ENST00000440240 LPCAT1Q8NF37 534 aa20.59■□□□□ 0.89
CPNE1-219ENST00000440240 OR10G6Q8NH81 332 aa20.59■□□□□ 0.89
CPNE1-219ENST00000440240 CCHCR1Q8TD31 782 aa20.59■□□□□ 0.89
CPNE1-219ENST00000440240 DDA1Q9BW61 102 aa20.59■□□□□ 0.89
CPNE1-219ENST00000440240 FAM83DQ9H4H8 585 aa20.59■□□□□ 0.89
CPNE1-219ENST00000440240 RMI1Q9H9A7 625 aa20.59■□□□□ 0.89
CPNE1-219ENST00000440240 HEMK1Q9Y5R4 338 aaPredicted RBP20.59■□□□□ 0.89
CPNE1-219ENST00000440240 TLN1Q9Y490 2541 aaKnown RBP20.59■□□□□ 0.89
CPNE1-219ENST00000440240 TRBV23OR9-2A0A075B6M9 112 aa20.58■□□□□ 0.89
CPNE1-219ENST00000440240 ANKRD66B4E2M5 251 aa20.58■□□□□ 0.89
CPNE1-219ENST00000440240 GOLGA6L19H0YKK7 550 aa20.58■□□□□ 0.89
CPNE1-219ENST00000440240 H2AFZP0C0S5 128 aa20.58■□□□□ 0.89
CPNE1-219ENST00000440240 PPM1FP49593 454 aaPredicted RBP20.58■□□□□ 0.89
CPNE1-219ENST00000440240 NIPAL4Q0D2K0 466 aa20.58■□□□□ 0.89
CPNE1-219ENST00000440240 NFATC3Q12968 1075 aa20.58■□□□□ 0.89
CPNE1-219ENST00000440240 H2AFVQ71UI9 128 aa20.58■□□□□ 0.89
CPNE1-219ENST00000440240 CCDC13Q8IYE1 715 aa20.58■□□□□ 0.89
CPNE1-219ENST00000440240 SLC37A2Q8TED4 501 aa20.58■□□□□ 0.89
CPNE1-219ENST00000440240 CTNNBL1Q8WYA6 563 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms