RNA–Protein interactions for RNA: ENST00000439209.5

LRTOMT-208, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, human

TSL 3 BASIC

Gene LRTOMT, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTOMT-208	ENST00000439209	MARK2	Q7KZI7	788 aa	Known RBP	11.14	□□□□□ -0.63
LRTOMT-208	ENST00000439209	ZNF765	Q7L2R6	523 aa		11.14	□□□□□ -0.63
LRTOMT-208	ENST00000439209	PIM3	Q86V86	326 aa		11.14	□□□□□ -0.63
LRTOMT-208	ENST00000439209	RCBTB1	Q8NDN9	531 aa		11.14	□□□□□ -0.63
LRTOMT-208	ENST00000439209	LPCAT1	Q8NF37	534 aa		11.14	□□□□□ -0.63
LRTOMT-208	ENST00000439209	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.14	□□□□□ -0.63
LRTOMT-208	ENST00000439209	USP7	Q93009	1102 aa		11.14	□□□□□ -0.63
LRTOMT-208	ENST00000439209	FATE1	Q969F0	183 aa		11.14	□□□□□ -0.63
LRTOMT-208	ENST00000439209	COX14	Q96I36	57 aa		11.14	□□□□□ -0.63
LRTOMT-208	ENST00000439209	TSGA13	Q96PP4	275 aa		11.14	□□□□□ -0.63
LRTOMT-208	ENST00000439209	RIOK2	Q9BVS4	552 aa	Known RBP	11.14	□□□□□ -0.63
LRTOMT-208	ENST00000439209	UVRAG	Q9P2Y5	699 aa		11.14	□□□□□ -0.63
LRTOMT-208	ENST00000439209	AMACR	Q9UHK6	382 aa		11.14	□□□□□ -0.63
LRTOMT-208	ENST00000439209	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	11.14	□□□□□ -0.63
LRTOMT-208	ENST00000439209	IGHV5-10-1	A0A0J9YXX1	117 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	PYGL	P06737	847 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	KRT7	P08729	469 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	H2AFZ	P0C0S5	128 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	CCL4	P13236	92 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	CA4	P22748	312 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	CES1	P23141	567 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	CD1C	P29017	333 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	HNRNPH3	P31942	346 aa	Known RBP	11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	CSF2RB	P32927	897 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	BIRC2	Q13490	618 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	PEX6	Q13608	980 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	SLC18A3	Q16572	532 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	PYCR3	Q53H96	274 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	FAM182A	Q5T1J6	154 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	NKAIN2	Q5VXU1	208 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	USP53	Q70EK8	1073 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	H2AFV	Q71UI9	128 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	VASH2	Q86V25	355 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	NLRP8	Q86W28	1048 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	ZFAND4	Q86XD8	727 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	GALNT13	Q8IUC8	556 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	MAP7D3	Q8IWC1	876 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	CCDC13	Q8IYE1	715 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	EXD1	Q8NHP7	514 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	HDAC11	Q96DB2	347 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	CCDC74B	Q96LY2	380 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	WDR24	Q96S15	920 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	LYSMD1	Q96S90	227 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	XPO4	Q9C0E2	1151 aa	Known RBP	11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	PCDH9	Q9HC56	1237 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	HAUS2	Q9NVX0	235 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	DTL	Q9NZJ0	730 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	DNPEP	Q9ULA0	475 aa		11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	OAS3	Q9Y6K5	1087 aa	Known RBP	11.13	□□□□□ -0.63
LRTOMT-208	ENST00000439209	IGHV1OR21-1	A0A087WYE8	117 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	C1orf232	A0A0U1RR37	186 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	FADS2P1	A8MWK0	482 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	KCNK1	O00180	336 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	HGS	O14964	777 aa	Predicted RBP	11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	ZW10	O43264	779 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	DNAJC6	O75061	913 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	ASMTL	O95671	621 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	EML2	O95834	649 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	ATP1A1	P05023	1023 aa	Known RBP	11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	MMP2	P08253	660 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	MX2	P20592	715 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	KDELR1	P24390	212 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	MAN1A1	P33908	653 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	CD86	P42081	329 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	GPR3	P46089	330 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	LIMK2	P53671	638 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	ZBTB17	Q13105	803 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	CLPP	Q16740	277 aa	Predicted RBP	11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	ASTE1	Q2TB18	679 aa	Predicted RBP	11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	ZFYVE27	Q5T4F4	411 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	HENMT1	Q5T8I9	393 aa	Known RBP	11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	ZNF761	Q86XN6	746 aa	Predicted RBP	11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	NRSN1	Q8IZ57	195 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	PLD5	Q8N7P1	536 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	CCNY	Q8ND76	341 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	SLC37A2	Q8TED4	501 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	RAPGEF5	Q92565	580 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	PMEPA1	Q969W9	287 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	RNF157	Q96PX1	679 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	TMEM9	Q9P0T7	183 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	PRKAB1	Q9Y478	270 aa		11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	SETX	Q7Z333	2677 aa	Known RBP	11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	SPEN	Q96T58	3664 aa	Known RBP	11.12	□□□□□ -0.63
LRTOMT-208	ENST00000439209	TRBV23OR9-2	A0A075B6M9	112 aa		11.11	□□□□□ -0.63
LRTOMT-208	ENST00000439209	LRRD1	A4D1F6	860 aa		11.11	□□□□□ -0.63
LRTOMT-208	ENST00000439209	JCHAIN	P01591	159 aa		11.11	□□□□□ -0.63
LRTOMT-208	ENST00000439209	TMEM253	P0C7T8	217 aa		11.11	□□□□□ -0.63
LRTOMT-208	ENST00000439209	THRA	P10827	490 aa		11.11	□□□□□ -0.63
LRTOMT-208	ENST00000439209	WT1	P19544	449 aa	Predicted RBP	11.11	□□□□□ -0.63
LRTOMT-208	ENST00000439209	MPST	P25325	297 aa		11.11	□□□□□ -0.63
LRTOMT-208	ENST00000439209	FASLG	P48023	281 aa		11.11	□□□□□ -0.63
LRTOMT-208	ENST00000439209	SPINT3	P49223	89 aa		11.11	□□□□□ -0.63
LRTOMT-208	ENST00000439209	ARSD	P51689	593 aa		11.11	□□□□□ -0.63
LRTOMT-208	ENST00000439209	RPL26	P61254	145 aa	Known RBP	11.11	□□□□□ -0.63
LRTOMT-208	ENST00000439209	PPID	Q08752	370 aa	Known RBP	11.11	□□□□□ -0.63
LRTOMT-208	ENST00000439209	LRP8	Q14114	963 aa		11.11	□□□□□ -0.63
LRTOMT-208	ENST00000439209	GALNT3	Q14435	633 aa		11.11	□□□□□ -0.63
LRTOMT-208	ENST00000439209	MESD	Q14696	234 aa		11.11	□□□□□ -0.63
LRTOMT-208	ENST00000439209	QPCT	Q16769	361 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms