RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 EFHC1Q5JVL4 640 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 GPATCH4Q5T3I0 446 aaKnown RBP3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 SPSB3Q6PJ21 355 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 DSTYKQ6XUX3 929 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 C1orf122Q6ZSJ8 110 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 ANKARQ7Z5J8 1434 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 PALB2Q86YC2 1186 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 DIS3L2Q8IYB7 885 aaKnown RBP3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 C11orf65Q8NCR3 313 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 CADM4Q8NFZ8 388 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 RNF183Q96D59 192 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 RTP4Q96DX8 246 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 SIN3AQ96ST3 1273 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 PIP5K1AQ99755 562 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 NSD3Q9BZ95 1437 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 CLK4Q9HAZ1 481 aaKnown RBP3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 MPP6Q9NZW5 540 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 MKLN1Q9UL63 735 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 EIF3AQ14152 1382 aaKnown RBP3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 CCDC7Q96M83 1385 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 TRPM3Q9HCF6 1732 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 PPIP5K1Q6PFW1 1433 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 A0A0U1RQJ8 604 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 CBY3A6NI87 242 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 HSPB2A8KAH6 182 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 SMTNL1A8MU46 457 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 KLRF2D3W0D1 207 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 TGFB1I1O43294 461 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 ITM2AO43736 263 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 KRT86O43790 486 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 KCNJ13O60928 360 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 ZNF8P17098 575 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 ICAM3P32942 547 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 TTKP33981 857 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 GNAQP50148 359 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 HDAC4P56524 1084 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 ST3GAL1Q11201 340 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 HYAL1Q12794 435 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 GRIK3Q13003 919 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 KRT81Q14533 505 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 HSPB2Q16082 182 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 PLEKHO1Q53GL0 409 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 DCAF6Q58WW2 860 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 C9orf50Q5SZB4 431 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 SLC46A3Q7Z3Q1 461 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 TBC1D26Q86UD7 250 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 CUZD1Q86UP6 607 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 NOXA1Q86UR1 476 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 DHX40Q8IX18 779 aaKnown RBP3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 ANKRD52Q8NB46 1076 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 DNASE2BQ8WZ79 361 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 PABPC5Q96DU9 382 aaKnown RBP3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 LMLNQ96KR4 655 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 C7orf26Q96N11 449 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 NR1H4Q96RI1 486 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 FIZ1Q96SL8 496 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 BARD1Q99728 777 aaKnown RBP3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 C1QTNF4Q9BXJ3 329 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 GLIS2Q9BZE0 524 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 RANBP17Q9H2T7 1088 aaKnown RBP3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 GAREM1Q9H706 876 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 KCNG2Q9UJ96 466 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 FAM96BQ9Y3D0 163 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 PCDHGB1Q9Y5G3 927 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 CASP8AP2Q9UKL3 1982 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 BTAF1O14981 1849 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 TUBGCP6Q96RT7 1819 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 ACEP12821 1306 aa3.39□□□□□ -1.87
HMGB3P12-201ENST00000438745 ABCC11Q96J66 1382 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 COL18A1P39060 1754 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 THSD7BQ9C0I4 1608 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 NPIPB15A6NHN6 443 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 CYSRT1A8MQ03 144 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 KDM4EB2RXH2 506 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 SLC16A5O15375 505 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 BCAT2O15382 392 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 RGS11O94810 467 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 PTPN2P17706 415 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 SRD5A1P18405 259 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 CAPN3P20807 821 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 MYF6P23409 242 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 NFKBIAP25963 317 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 CXCR3P49682 368 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 RARSP54136 660 aaKnown RBP3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 ERVFC1-1P60608 527 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 RPS3AP61247 264 aaKnown RBP3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 EEF1A2Q05639 463 aaKnown RBP3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 TMEM115Q12893 351 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 COASYQ13057 564 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 ITGADQ13349 1161 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 ARHGEF6Q15052 776 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 MED22Q15528 200 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 MAPRE1Q15691 268 aaKnown RBP3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 HLFQ16534 295 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 COL28A1Q2UY09 1125 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 WDR78Q5VTH9 848 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 INO80CQ6PI98 192 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 FBXO46Q6PJ61 603 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms