RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 EEF1DP3Q658K8 133 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 FAM124AQ86V42 546 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 RNF148Q8N7C7 305 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 AP2M1Q96CW1 435 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 TCF25Q9BQ70 676 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 KDM4FA0A1W2PPD8 638 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 PRMT5O14744 637 aaPredicted RBP15.82■□□□□ 0.12
PTPN13-204ENST00000436978 SCAMP3O14828 347 aaKnown RBP15.82■□□□□ 0.12
PTPN13-204ENST00000436978 MYL9P24844 172 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 TTMPQ5BVD1 217 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 TSEN2Q8NCE0 465 aaKnown RBP15.82■□□□□ 0.12
PTPN13-204ENST00000436978 SLC22A17Q8WUG5 538 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 PRCCQ92733 491 aaPredicted RBP15.82■□□□□ 0.12
PTPN13-204ENST00000436978 NUAK2Q9H093 628 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 XPR1Q9UBH6 696 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 BTRCQ9Y297 605 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 AP2A1O95782 977 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 ADRA1BP35368 520 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 ABCG1P45844 678 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 RSPH9Q9H1X1 276 aaPredicted RBP15.82■□□□□ 0.12
PTPN13-204ENST00000436978 RNASEH2AO75792 299 aaKnown RBP15.82■□□□□ 0.12
PTPN13-204ENST00000436978 CHN2P52757 468 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 FAM171BQ6P995 826 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 CXXC5Q7LFL8 322 aaKnown RBP15.82■□□□□ 0.12
PTPN13-204ENST00000436978 PCDH20Q8N6Y1 951 aaKnown RBP15.82■□□□□ 0.12
PTPN13-204ENST00000436978 ZNF563Q8TA94 476 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 POP4O95707 220 aaKnown RBP15.82■□□□□ 0.12
PTPN13-204ENST00000436978 PIRTP0C851 137 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 LDLRAP1Q5SW96 308 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 TMPRSS11BQ86T26 416 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 PPP1R13LQ8WUF5 828 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 DHX33Q9H6R0 707 aaKnown RBP15.82■□□□□ 0.12
PTPN13-204ENST00000436978 UNC5CO95185 931 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 IDSP22304 550 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 SSR2P43308 183 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 NRF1Q16656 503 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 TNS4Q8IZW8 715 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 RASGEF1CQ8N431 466 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 BCL2L14Q9BZR8 327 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 ZNF490Q9ULM2 529 aaPredicted RBP15.81■□□□□ 0.12
PTPN13-204ENST00000436978 TRAF6Q9Y4K3 522 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 G3V2T6 193 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 OR10H3O60404 316 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 DNAJA2O60884 412 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 TRBC1P01850 177 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 GRSF1Q12849 480 aaKnown RBP eCLIP15.81■□□□□ 0.12
PTPN13-204ENST00000436978 RINLQ6ZS11 566 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 TDRD1Q9BXT4 1180 aaKnown RBP15.81■□□□□ 0.12
PTPN13-204ENST00000436978 CHKBQ9Y259 395 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 VIPP01282 170 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 MARCKSL1P49006 195 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 AP1S1P61966 158 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 DNAJC11Q9NVH1 559 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 FSBPO95073 299 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 CLDN9O95484 217 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 DDX6P26196 483 aaKnown RBP eCLIP15.81■□□□□ 0.12
PTPN13-204ENST00000436978 UBAP2LQ14157 1087 aaKnown RBP15.81■□□□□ 0.12
PTPN13-204ENST00000436978 XKR4Q5GH76 650 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 ADSSP30520 456 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 CCNYL2Q5T2Q4 361 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 HECTD2Q5U5R9 776 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 OSBPL11Q9BXB4 747 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 SPATA2Q9UM82 520 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 N6AMT1Q9Y5N5 214 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 CPSF6Q16630 551 aaKnown RBP eCLIP15.81■□□□□ 0.12
PTPN13-204ENST00000436978 ATP13A4Q4VNC1 1196 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 ERICH5Q6P6B1 374 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 CPXM1Q96SM3 734 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 RGPD1P0DJD0 1748 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 PTP4A2Q12974 167 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 PRR23CQ6ZRP0 262 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 CLVS1Q8IUQ0 354 aaPredicted RBP15.81■□□□□ 0.12
PTPN13-204ENST00000436978 METTL21AQ8WXB1 218 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 KLHL31Q9H511 634 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 STXBP5LQ9Y2K9 1186 aa15.81■□□□□ 0.12
PTPN13-204ENST00000436978 DHRS12A0PJE2 317 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 OAFQ86UD1 273 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 MAT2BQ9NZL9 334 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 SAMHD1Q9Y3Z3 626 aaKnown RBP15.8■□□□□ 0.12
PTPN13-204ENST00000436978 ZFP37Q9Y6Q3 630 aaPredicted RBP15.8■□□□□ 0.12
PTPN13-204ENST00000436978 C4orf32Q8N8J7 132 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 SLC4A11Q8NBS3 891 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 EPHX1P07099 455 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 SMPD1P17405 629 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 ALOX12P18054 663 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 PTPN20Q4JDL3 420 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 SLC25A24Q6NUK1 477 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 ANKS1BQ7Z6G8 1248 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 TTC29Q8NA56 475 aaPredicted RBP15.8■□□□□ 0.12
PTPN13-204ENST00000436978 UXS1Q8NBZ7 420 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 OR7A2PQ8NGA2 310 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 EEF1AKMT1Q8WVE0 214 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 SLC25A51Q9H1U9 297 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 ATXN2Q99700 1313 aaKnown RBP15.8■□□□□ 0.12
PTPN13-204ENST00000436978 INSIG1O15503 277 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 IRGCQ6NXR0 463 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 DEF8Q6ZN54 512 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 KBTBD8Q8NFY9 601 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 RASSF5Q8WWW0 418 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 CAPNS2Q96L46 248 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms