RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 NEMP2A6NFY4 417 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 PRRT4C9JH25 899 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 DLX3O60479 287 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 TRIM13O60858 407 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 SRP72O76094 671 aaKnown RBP21.03■□□□□ 0.96
PTPRF-207ENST00000436724 ANKRD54Q6NXT1 300 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 CRTC1Q6UUV9 634 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 SCRN2Q96FV2 425 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 TCF12Q99081 682 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 GATA5Q9BWX5 397 aaPredicted RBP21.03■□□□□ 0.96
PTPRF-207ENST00000436724 MRPL46Q9H2W6 279 aaKnown RBP21.03■□□□□ 0.96
PTPRF-207ENST00000436724 DNAJC16Q9Y2G8 782 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 SCN8AQ9UQD0 1980 aa21.03■□□□□ 0.96
PTPRF-207ENST00000436724 PRAMEF1O95521 474 aa21.02■□□□□ 0.96
PTPRF-207ENST00000436724 BPIP17213 487 aa21.02■□□□□ 0.96
PTPRF-207ENST00000436724 GRK2P25098 689 aa21.02■□□□□ 0.96
PTPRF-207ENST00000436724 RECQLP46063 649 aaPredicted RBP21.02■□□□□ 0.96
PTPRF-207ENST00000436724 ARFIP2P53365 341 aa21.02■□□□□ 0.96
PTPRF-207ENST00000436724 ABCE1P61221 599 aaKnown RBP21.02■□□□□ 0.96
PTPRF-207ENST00000436724 RAD51Q06609 339 aa21.02■□□□□ 0.96
PTPRF-207ENST00000436724 HSF5Q4G112 596 aaPredicted RBP21.02■□□□□ 0.96
PTPRF-207ENST00000436724 SETMARQ53H47 684 aaPredicted RBP21.02■□□□□ 0.96
PTPRF-207ENST00000436724 VITQ6UXI7 678 aa21.02■□□□□ 0.96
PTPRF-207ENST00000436724 RDH11Q8TC12 318 aa21.02■□□□□ 0.96
PTPRF-207ENST00000436724 SCG3Q8WXD2 468 aaKnown RBP21.02■□□□□ 0.96
PTPRF-207ENST00000436724 MRPL57Q9BQC6 102 aaKnown RBP21.02■□□□□ 0.96
PTPRF-207ENST00000436724 NSUN3Q9H649 340 aaKnown RBP21.02■□□□□ 0.96
PTPRF-207ENST00000436724 IL26Q9NPH9 171 aa21.02■□□□□ 0.96
PTPRF-207ENST00000436724 HPS4Q9NQG7 708 aa21.02■□□□□ 0.96
PTPRF-207ENST00000436724 GALPQ9UBC7 116 aa21.02■□□□□ 0.96
PTPRF-207ENST00000436724 CORO1CQ9ULV4 474 aaPredicted RBP21.02■□□□□ 0.96
PTPRF-207ENST00000436724 SLC30A1Q9Y6M5 507 aa21.02■□□□□ 0.96
PTPRF-207ENST00000436724 NFATC1O95644 943 aa21.02■□□□□ 0.95
PTPRF-207ENST00000436724 LHCGRP22888 699 aa21.02■□□□□ 0.95
PTPRF-207ENST00000436724 NNMTP40261 264 aa21.02■□□□□ 0.95
PTPRF-207ENST00000436724 CCR10P46092 362 aa21.02■□□□□ 0.95
PTPRF-207ENST00000436724 TTPAP49638 278 aa21.02■□□□□ 0.95
PTPRF-207ENST00000436724 TECRLQ5HYJ1 363 aa21.02■□□□□ 0.95
PTPRF-207ENST00000436724 AGAP9Q5VTM2 703 aa21.02■□□□□ 0.95
PTPRF-207ENST00000436724 LRRC66Q68CR7 880 aa21.02■□□□□ 0.95
PTPRF-207ENST00000436724 GDPD4Q6W3E5 623 aa21.02■□□□□ 0.95
PTPRF-207ENST00000436724 CCDC91Q7Z6B0 441 aa21.02■□□□□ 0.95
PTPRF-207ENST00000436724 ERP27Q96DN0 273 aa21.02■□□□□ 0.95
PTPRF-207ENST00000436724 WASF2Q9Y6W5 498 aa21.02■□□□□ 0.95
PTPRF-207ENST00000436724 A8MUI8 341 aa21.01■□□□□ 0.95
PTPRF-207ENST00000436724 LEFTY1O75610 366 aa21.01■□□□□ 0.95
PTPRF-207ENST00000436724 RHOBTB1O94844 696 aa21.01■□□□□ 0.95
PTPRF-207ENST00000436724 CTSLP07711 333 aa21.01■□□□□ 0.95
PTPRF-207ENST00000436724 ZNF37AP17032 561 aaPredicted RBP21.01■□□□□ 0.95
PTPRF-207ENST00000436724 KDSRQ06136 332 aa21.01■□□□□ 0.95
PTPRF-207ENST00000436724 GRM2Q14416 872 aa21.01■□□□□ 0.95
PTPRF-207ENST00000436724 POM121L1PQ3SYA9 428 aa21.01■□□□□ 0.95
PTPRF-207ENST00000436724 TMEM184AQ6ZMB5 413 aa21.01■□□□□ 0.95
PTPRF-207ENST00000436724 ZNF398Q8TD17 642 aa21.01■□□□□ 0.95
PTPRF-207ENST00000436724 ZNF641Q96N77 438 aaPredicted RBP21.01■□□□□ 0.95
PTPRF-207ENST00000436724 LRRC37BQ96QE4 947 aa21.01■□□□□ 0.95
PTPRF-207ENST00000436724 PLA2G2FQ9BZM2 168 aa21.01■□□□□ 0.95
PTPRF-207ENST00000436724 CCDC68Q9H2F9 335 aa21.01■□□□□ 0.95
PTPRF-207ENST00000436724 BRD9Q9H8M2 597 aa21.01■□□□□ 0.95
PTPRF-207ENST00000436724 PNPOQ9NVS9 261 aa21.01■□□□□ 0.95
PTPRF-207ENST00000436724 MID2Q9UJV3 735 aa21.01■□□□□ 0.95
PTPRF-207ENST00000436724 PRUNE2Q8WUY3 3088 aa21.01■□□□□ 0.95
PTPRF-207ENST00000436724 ZBTB14O43829 449 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 NIPSNAP2O75323 286 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 ATP5BP06576 529 aaKnown RBP21■□□□□ 0.95
PTPRF-207ENST00000436724 CHRM1P11229 460 aaPredicted RBP21■□□□□ 0.95
PTPRF-207ENST00000436724 UGT1A6P19224 532 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 UGT1A1P22309 533 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 UGT1A4P22310 534 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 KCNA5P22460 613 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 UGT1A3P35503 534 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 UGT1A5P35504 534 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 KCNC1P48547 511 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 NAGLUP54802 743 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 CACNG1Q06432 222 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 DLX2Q07687 328 aaPredicted RBP21■□□□□ 0.95
PTPRF-207ENST00000436724 PDAP1Q13442 181 aaKnown RBP21■□□□□ 0.95
PTPRF-207ENST00000436724 SETDB1Q15047 1291 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 ARSIQ5FYB1 569 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 CTSL3PQ5NE16 218 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 LIPMQ5VYY2 423 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 RFLNAQ6ZTI6 216 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 USP45Q70EL2 814 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 MTDHQ86UE4 582 aaKnown RBP21■□□□□ 0.95
PTPRF-207ENST00000436724 TXNDC5Q8NBS9 432 aaKnown RBP21■□□□□ 0.95
PTPRF-207ENST00000436724 LYSMD1Q96S90 227 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 SLC30A3Q99726 388 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 HEPHQ9BQS7 1158 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 ALG9Q9H6U8 611 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 ZFP14Q9HCL3 533 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 ELOVL2Q9NXB9 296 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 GTSE1Q9NYZ3 720 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 CDH7Q9ULB5 785 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 STK38LQ9Y2H1 464 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 SLC27A6Q9Y2P4 619 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 ANTXRLA6NF34 631 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 WASH3PC4AMC7 463 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 TFEBP19484 476 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 SUOXP51687 545 aa21■□□□□ 0.95
PTPRF-207ENST00000436724 AQP5P55064 265 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms