RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 TRPT1Q86TN4 253 aaKnown RBP3.48□□□□□ -1.85
PTPN4-205ENST00000433888 CERS3Q8IU89 383 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 CCDC146Q8IYE0 955 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 BEST3Q8N1M1 668 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 OR52I2Q8NH67 350 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 NEUROD6Q96NK8 337 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 LBHD1Q9BQE6 289 aaPredicted RBP3.48□□□□□ -1.85
PTPN4-205ENST00000433888 SLC52A3Q9NQ40 469 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 ITM2CQ9NQX7 267 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 hCG_1642624A0A1W2PR95 340 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 ZNF821O75541 412 aaPredicted RBP3.47□□□□□ -1.85
PTPN4-205ENST00000433888 FASLGP48023 281 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 ARCN1P48444 511 aaKnown RBP3.47□□□□□ -1.85
PTPN4-205ENST00000433888 PAPOLAP51003 745 aaKnown RBP3.47□□□□□ -1.85
PTPN4-205ENST00000433888 ARL4CP56559 192 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 DSCR10P59022 87 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 TECRLQ5HYJ1 363 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 MAP3K21Q5TCX8 1036 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 ANO1Q5XXA6 986 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 OR7E24Q6IFN5 339 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 RAD9BQ6WBX8 426 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 QSOX2Q6ZRP7 698 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 SLC46A3Q7Z3Q1 461 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 NRROSQ86YC3 692 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 LYG1Q8N1E2 194 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 HMGCLL1Q8TB92 370 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 WDR20Q8TBZ3 569 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 TBC1D20Q96BZ9 403 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 LINGO1Q96FE5 620 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 STAMBPL1Q96FJ0 436 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 GRAMD2BQ96HH9 432 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 CDK19Q9BWU1 502 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 TTYH1Q9H313 450 aaPredicted RBP3.47□□□□□ -1.85
PTPN4-205ENST00000433888 POLG2Q9UHN1 485 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 ACSL5Q9ULC5 683 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 PCNX3Q9H6A9 2034 aa3.47□□□□□ -1.85
PTPN4-205ENST00000433888 CCDC194A0A1B0GVG4 234 aa3.46□□□□□ -1.86
PTPN4-205ENST00000433888 SEC14L5O43304 696 aa3.46□□□□□ -1.86
PTPN4-205ENST00000433888 POLR2CP19387 275 aaPredicted RBP3.46□□□□□ -1.86
PTPN4-205ENST00000433888 ZNF10P21506 573 aaPredicted RBP3.46□□□□□ -1.86
PTPN4-205ENST00000433888 GRK6P43250 576 aa3.46□□□□□ -1.86
PTPN4-205ENST00000433888 CSNK2A1P68400 391 aaPredicted RBP3.46□□□□□ -1.86
PTPN4-205ENST00000433888 NAE1Q13564 534 aa3.46□□□□□ -1.86
PTPN4-205ENST00000433888 PPP2R5BQ15173 497 aa3.46□□□□□ -1.86
PTPN4-205ENST00000433888 PDCD2Q16342 344 aaPredicted RBP3.46□□□□□ -1.86
PTPN4-205ENST00000433888 TMEM35AQ53FP2 167 aa3.46□□□□□ -1.86
PTPN4-205ENST00000433888 FRG2Q64ET8 278 aa3.46□□□□□ -1.86
PTPN4-205ENST00000433888 SUSD1Q6UWL2 747 aa3.46□□□□□ -1.86
PTPN4-205ENST00000433888 ACVR1CQ8NER5 493 aa3.46□□□□□ -1.86
PTPN4-205ENST00000433888 CSNK2A3Q8NEV1 391 aa3.46□□□□□ -1.86
PTPN4-205ENST00000433888 QRFPRQ96P65 431 aa3.46□□□□□ -1.86
PTPN4-205ENST00000433888 ERVMER34-1Q9H9K5 563 aa3.46□□□□□ -1.86
PTPN4-205ENST00000433888 UPF2Q9HAU5 1272 aaKnown RBP3.46□□□□□ -1.86
PTPN4-205ENST00000433888 C2orf42Q9NWW7 574 aa3.46□□□□□ -1.86
PTPN4-205ENST00000433888 HCN3Q9P1Z3 774 aa3.46□□□□□ -1.86
PTPN4-205ENST00000433888 PAK5Q9P286 719 aa3.46□□□□□ -1.86
PTPN4-205ENST00000433888 DISP3Q9P2K9 1392 aa3.46□□□□□ -1.86
PTPN4-205ENST00000433888 ADAMTS9Q9P2N4 1935 aa3.46□□□□□ -1.86
PTPN4-205ENST00000433888 MYH15Q9Y2K3 1946 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 C5orf60A6NFR6 353 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 GAGE10A6NGK3 116 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 IRAK2O43187 625 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 CIDEAO60543 219 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 AZU1P20160 251 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 CDH15P55291 814 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 SORDQ00796 357 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 SLC12A1Q13621 1099 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 DECR1Q16698 335 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 ZC2HC1CQ53FD0 456 aaPredicted RBP3.45□□□□□ -1.86
PTPN4-205ENST00000433888 TTI2Q6NXR4 508 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 RBMS3Q6XE24 437 aaKnown RBP3.45□□□□□ -1.86
PTPN4-205ENST00000433888 SH2D6Q7Z4S9 175 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.45□□□□□ -1.86
PTPN4-205ENST00000433888 HAPLN4Q86UW8 402 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 SPAG16Q8N0X2 631 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 THAP6Q8TBB0 222 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 HCAR2Q8TDS4 363 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 ZNF473Q8WTR7 871 aaKnown RBP3.45□□□□□ -1.86
PTPN4-205ENST00000433888 ORAI1Q96D31 301 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 ARHGEF26Q96DR7 871 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 PABPC5Q96DU9 382 aaKnown RBP3.45□□□□□ -1.86
PTPN4-205ENST00000433888 SENP5Q96HI0 755 aaPredicted RBP3.45□□□□□ -1.86
PTPN4-205ENST00000433888 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 SEBOXQ9HB31 216 aaPredicted RBP3.45□□□□□ -1.86
PTPN4-205ENST00000433888 ERVK-11Q9UQG0 969 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 C2CD2Q9Y426 696 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 CEPT1Q9Y6K0 416 aa3.45□□□□□ -1.86
PTPN4-205ENST00000433888 CLK1P49759 484 aaKnown RBP3.44□□□□□ -1.86
PTPN4-205ENST00000433888 CCR5P51681 352 aa3.44□□□□□ -1.86
PTPN4-205ENST00000433888 FOXM1Q08050 763 aa3.44□□□□□ -1.86
PTPN4-205ENST00000433888 TDGQ13569 410 aa3.44□□□□□ -1.86
PTPN4-205ENST00000433888 ATG16L1Q676U5 607 aa3.44□□□□□ -1.86
PTPN4-205ENST00000433888 PQLC2Q6ZP29 291 aa3.44□□□□□ -1.86
PTPN4-205ENST00000433888 ANO5Q75V66 913 aa3.44□□□□□ -1.86
PTPN4-205ENST00000433888 SAMD3Q8N6K7 520 aa3.44□□□□□ -1.86
PTPN4-205ENST00000433888 TAAR8Q969N4 342 aa3.44□□□□□ -1.86
PTPN4-205ENST00000433888 LINC00479Q96M42 142 aa3.44□□□□□ -1.86
PTPN4-205ENST00000433888 MAP3K20Q9NYL2 800 aaKnown RBP3.44□□□□□ -1.86
PTPN4-205ENST00000433888 OGFRQ9NZT2 677 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms