RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 ACTR1BP42025 376 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 MAPK10P53779 464 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 ACTR1AP61163 376 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 ASTE1Q2TB18 679 aaPredicted RBP15.44■□□□□ 0.06
SEC13-210ENST00000428626 LINC00303Q3SY05 128 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 MAP9Q49MG5 647 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 VASH2Q86V25 355 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 PIM3Q86V86 326 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 DTX1Q86Y01 620 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 KCTD6Q8NC69 237 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 RAPGEF5Q92565 580 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 COX14Q96I36 57 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 OR2M4Q96R27 311 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 ZNF670Q9BS34 389 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 TMEM9Q9P0T7 183 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 CTTNBP2NLQ9P2B4 639 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 TTLL3Q9Y4R7 772 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 BSNQ9UPA5 3926 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 TRBV23OR9-2A0A075B6M9 112 aa15.43■□□□□ 0.06
SEC13-210ENST00000428626 INPP4BO15327 924 aa15.43■□□□□ 0.06
SEC13-210ENST00000428626 LIPCP11150 499 aa15.43■□□□□ 0.06
SEC13-210ENST00000428626 CCNCP24863 283 aa15.43■□□□□ 0.06
SEC13-210ENST00000428626 MPSTP25325 297 aa15.43■□□□□ 0.06
SEC13-210ENST00000428626 NFKBIAP25963 317 aa15.43■□□□□ 0.06
SEC13-210ENST00000428626 HNRNPH3P31942 346 aaKnown RBP15.43■□□□□ 0.06
SEC13-210ENST00000428626 IFI16Q16666 785 aaKnown RBP15.43■□□□□ 0.06
SEC13-210ENST00000428626 HADHQ16836 314 aaKnown RBP15.43■□□□□ 0.06
SEC13-210ENST00000428626 ZNF765Q7L2R6 523 aa15.43■□□□□ 0.06
SEC13-210ENST00000428626 NLRP8Q86W28 1048 aa15.43■□□□□ 0.06
SEC13-210ENST00000428626 ZNF761Q86XN6 746 aaPredicted RBP15.43■□□□□ 0.06
SEC13-210ENST00000428626 CNTD1Q8N815 330 aa15.43■□□□□ 0.06
SEC13-210ENST00000428626 EXD3Q8N9H8 876 aa15.43■□□□□ 0.06
SEC13-210ENST00000428626 LPCAT1Q8NF37 534 aa15.43■□□□□ 0.06
SEC13-210ENST00000428626 FATE1Q969F0 183 aa15.43■□□□□ 0.06
SEC13-210ENST00000428626 EID2BQ96D98 161 aa15.43■□□□□ 0.06
SEC13-210ENST00000428626 CCDC74BQ96LY2 380 aa15.43■□□□□ 0.06
SEC13-210ENST00000428626 CMKLR1Q99788 373 aa15.43■□□□□ 0.06
SEC13-210ENST00000428626 DTLQ9NZJ0 730 aa15.43■□□□□ 0.06
SEC13-210ENST00000428626 PRKAB1Q9Y478 270 aa15.43■□□□□ 0.06
SEC13-210ENST00000428626 SPTA1P02549 2419 aa15.42■□□□□ 0.06
SEC13-210ENST00000428626 IGHV1OR21-1A0A087WYE8 117 aa15.42■□□□□ 0.06
SEC13-210ENST00000428626 FADS2P1A8MWK0 482 aa15.42■□□□□ 0.06
SEC13-210ENST00000428626 PYCARD-AS1I3L0S3 204 aa15.42■□□□□ 0.06
SEC13-210ENST00000428626 KCNK1O00180 336 aa15.42■□□□□ 0.06
SEC13-210ENST00000428626 DNAJC6O75061 913 aa15.42■□□□□ 0.06
SEC13-210ENST00000428626 ATP1A1P05023 1023 aaKnown RBP15.42■□□□□ 0.06
SEC13-210ENST00000428626 FGF3P11487 239 aaPredicted RBP15.42■□□□□ 0.06
SEC13-210ENST00000428626 ZNF30P17039 623 aa15.42■□□□□ 0.06
SEC13-210ENST00000428626 EPHB1P54762 984 aa15.42■□□□□ 0.06
SEC13-210ENST00000428626 ZBTB17Q13105 803 aa15.42■□□□□ 0.06
SEC13-210ENST00000428626 PDK2Q15119 407 aa15.42■□□□□ 0.06
SEC13-210ENST00000428626 QPCTQ16769 361 aa15.42■□□□□ 0.06
SEC13-210ENST00000428626 TIGD7Q6NT04 549 aaPredicted RBP15.42■□□□□ 0.06
SEC13-210ENST00000428626 PLD5Q8N7P1 536 aa15.42■□□□□ 0.06
SEC13-210ENST00000428626 TMEM159Q96B96 161 aa15.42■□□□□ 0.06
SEC13-210ENST00000428626 LYSMD1Q96S90 227 aa15.42■□□□□ 0.06
SEC13-210ENST00000428626 XPO4Q9C0E2 1151 aaKnown RBP15.42■□□□□ 0.06
SEC13-210ENST00000428626 CDH19Q9H159 772 aa15.42■□□□□ 0.06
SEC13-210ENST00000428626 PCDH9Q9HC56 1237 aa15.42■□□□□ 0.06
SEC13-210ENST00000428626 C3orf70A6NLC5 250 aaPredicted RBP15.41■□□□□ 0.06
SEC13-210ENST00000428626 JCHAINP01591 159 aa15.41■□□□□ 0.06
SEC13-210ENST00000428626 KDELR1P24390 212 aa15.41■□□□□ 0.06
SEC13-210ENST00000428626 CD86P42081 329 aa15.41■□□□□ 0.06
SEC13-210ENST00000428626 GPR3P46089 330 aa15.41■□□□□ 0.06
SEC13-210ENST00000428626 LIMK2P53671 638 aa15.41■□□□□ 0.06
SEC13-210ENST00000428626 SLC37A2Q8TED4 501 aa15.41■□□□□ 0.06
SEC13-210ENST00000428626 HTR3CQ8WXA8 447 aa15.41■□□□□ 0.06
SEC13-210ENST00000428626 JPH3Q8WXH2 748 aaPredicted RBP15.41■□□□□ 0.06
SEC13-210ENST00000428626 HDAC11Q96DB2 347 aa15.41■□□□□ 0.06
SEC13-210ENST00000428626 MED8Q96G25 268 aa15.41■□□□□ 0.06
SEC13-210ENST00000428626 RNF157Q96PX1 679 aa15.41■□□□□ 0.06
SEC13-210ENST00000428626 BRD8Q9H0E9 1235 aa15.41■□□□□ 0.06
SEC13-210ENST00000428626 UVRAGQ9P2Y5 699 aa15.41■□□□□ 0.06
SEC13-210ENST00000428626 AMACRQ9UHK6 382 aa15.41■□□□□ 0.06
SEC13-210ENST00000428626 H2AFZP0C0S5 128 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 THRAP10827 490 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 SPINT3P49223 89 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 TPM4P67936 248 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 CYP4F2P78329 520 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 SQSTM1Q13501 440 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 SLC18A3Q16572 532 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.4■□□□□ 0.06
SEC13-210ENST00000428626 HENMT1Q5T8I9 393 aaKnown RBP15.4■□□□□ 0.06
SEC13-210ENST00000428626 H2AFVQ71UI9 128 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 B4GALNT4Q76KP1 1039 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 CCDC13Q8IYE1 715 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 NRSN1Q8IZ57 195 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 NDUFAF2Q8N183 169 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 SFRP1Q8N474 314 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 OR4D9Q8NGE8 314 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 EXD1Q8NHP7 514 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 EXTL1Q92935 676 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 IQCDQ96DY2 449 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 SGF29Q96ES7 293 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 CEP41Q9BYV8 373 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 TBC1D29Q9UFV1 150 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 PCDHGA4Q9Y5G9 962 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 MYO18BQ8IUG5 2567 aa15.4■□□□□ 0.06
SEC13-210ENST00000428626 C1orf232A0A0U1RR37 186 aa15.39■□□□□ 0.05
SEC13-210ENST00000428626 A6NCN8 305 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms