RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 CSHL1Q14406 222 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 COL19A1Q14993 1142 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 TECRLQ5HYJ1 363 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 LRRC66Q68CR7 880 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 TRPM8Q7Z2W7 1104 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 SNX20Q7Z614 316 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 PIM3Q86V86 326 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 TERB1Q8NA31 727 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 RIPOR3Q96MK2 946 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 PLA2G2FQ9BZM2 168 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 NPHS2Q9NP85 383 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 IL36AQ9UHA7 158 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 USH1CQ9Y6N9 552 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 ZNF106Q9H2Y7 1883 aaKnown RBP15.13■□□□□ 0.01
ACTB-204ENST00000425660 UBA6A0AVT1 1052 aaPredicted RBP15.13■□□□□ 0.01
ACTB-204ENST00000425660 ESR1P03372 595 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 SPAM1P38567 509 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 OPRD1P41143 372 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 ITGA9Q13797 1035 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 GPR33Q49SQ1 333 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 SETMARQ53H47 684 aaPredicted RBP15.13■□□□□ 0.01
ACTB-204ENST00000425660 LIPMQ5VYY2 423 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 ZDHHC20Q5W0Z9 365 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 KLC3Q6P597 504 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 SPATA6LQ8N4H0 392 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 ST13P5Q8NFI4 369 aaPredicted RBP15.13■□□□□ 0.01
ACTB-204ENST00000425660 PPP1R14CQ8TAE6 165 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 SREK1Q8WXA9 508 aaKnown RBP15.13■□□□□ 0.01
ACTB-204ENST00000425660 KCNJ9Q92806 393 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.13■□□□□ 0.011e-15■■■■■ 133.4
ACTB-204ENST00000425660 CHFRQ96EP1 664 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 RMDN2Q96LZ7 410 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 P2RY12Q9H244 342 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 CCDC68Q9H2F9 335 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 KDM4CQ9H3R0 1056 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 KCNK13Q9HB14 408 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 TAS2R13Q9NYV9 303 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 OAS3Q9Y6K5 1087 aaKnown RBP15.13■□□□□ 0.01
ACTB-204ENST00000425660 EYSQ5T1H1 3165 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 SCN8AQ9UQD0 1980 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 MUC22E2RYF6 1773 aaPredicted RBP15.12■□□□□ 0.01
ACTB-204ENST00000425660 GLYATL1P3A0A0U1RQE8 302 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 ARNTLO00327 626 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 GPR39O43194 453 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 OR1I1O60431 355 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 ECI2O75521 394 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 RBP1P09455 135 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 CHRM1P11229 460 aaPredicted RBP15.12■□□□□ 0.01
ACTB-204ENST00000425660 PKMP14618 531 aaKnown RBP15.12■□□□□ 0.01
ACTB-204ENST00000425660 ZNF30P17039 623 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 SP100P23497 879 aaPredicted RBP15.12■□□□□ 0.01
ACTB-204ENST00000425660 FMO4P31512 558 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 GJA4P35212 333 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 PPARGP37231 505 aaPredicted RBP15.12■□□□□ 0.01
ACTB-204ENST00000425660 SLC1A6P48664 564 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 HNRNPA1L2Q32P51 320 aaKnown RBP15.12■□□□□ 0.01
ACTB-204ENST00000425660 ZNF805Q5CZA5 627 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 ARSIQ5FYB1 569 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 FAM151BQ6UXP7 276 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 CRLF3Q8IUI8 442 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 FGF14Q92915 247 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 MSLNLQ96KJ4 702 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 PLEKHG4BQ96PX9 1271 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 SORT1Q99523 831 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 TMEM245Q9H330 911 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 FAM96AQ9H5X1 160 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 ZNF395Q9H8N7 513 aaPredicted RBP15.12■□□□□ 0.01
ACTB-204ENST00000425660 GTSE1Q9NYZ3 720 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 B4GALT6Q9UBX8 382 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 KIAA1549LQ6ZVL6 1849 aa15.12■□□□□ 0.01
ACTB-204ENST00000425660 TMEM114B3SHH9 223 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 ITM2AO43736 263 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 ITGALP20701 1170 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 RPS3P23396 243 aaKnown RBP eCLIP15.11■□□□□ 0.012e-30■■■□□ 14.8
ACTB-204ENST00000425660 ARRB2P32121 409 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 LTBRP36941 435 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 MTHFRP42898 656 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 ABCE1P61221 599 aaKnown RBP15.11■□□□□ 0.01
ACTB-204ENST00000425660 CCDC15Q0P6D6 951 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 GRM2Q14416 872 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 CTSL3PQ5NE16 218 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 LYPLAL1Q5VWZ2 237 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 PARM1Q6UWI2 310 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 NAPRTQ6XQN6 538 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 ATG14Q6ZNE5 492 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 ISCA2Q86U28 154 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 YAF2Q8IY57 180 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 GPR26Q8NDV2 337 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 RFWD2Q8NHY2 731 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 THOC1Q96FV9 657 aaKnown RBP15.11■□□□□ 0.01
ACTB-204ENST00000425660 SCYL1Q96KG9 808 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 SIKE1Q9BRV8 207 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 MTG2Q9H4K7 406 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 ASB8Q9H765 288 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 SYTL2Q9HCH5 934 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 FNDC3AQ9Y2H6 1198 aaKnown RBP15.11■□□□□ 0.01
ACTB-204ENST00000425660 MTF2Q9Y483 593 aaPredicted RBP15.11■□□□□ 0.01
ACTB-204ENST00000425660 PCDHB1Q9Y5F3 818 aa15.11■□□□□ 0.01
ACTB-204ENST00000425660 SOX1O00570 391 aaPredicted RBP15.1■□□□□ 0.01
ACTB-204ENST00000425660 PRMT5O14744 637 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms