RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 ZNF540Q8NDQ6 660 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 MCUQ8NE86 351 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 PPHLN1Q8NEY8 458 aaKnown RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 TRAPPC12Q8WVT3 735 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 NANOS1Q8WY41 292 aaKnown RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 KCTD13Q8WZ19 329 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 SMPDL3BQ92485 455 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 UBE2E3Q969T4 207 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 C3orf49Q96BT1 292 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 HSPBAP1Q96EW2 488 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 BOD1Q96IK1 185 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 MAP3K14Q99558 947 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 NOD2Q9HC29 1040 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 AGO4Q9HCK5 861 aaKnown RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 BOKQ9UMX3 212 aaPredicted RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 CAMK2AQ9UQM7 478 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 TSC2P49815 1807 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 hCG_1809904A0A1W2PP81 198 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 A0A1W2PPE2 198 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 A0A1W2PR64 198 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 hCG_1642624A0A1W2PR95 340 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 A0A1W2PRV1 198 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 SERTM1A2A2V5 107 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 LEFTY2O00292 366 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 SIGLEC6O43699 453 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 POLBP06746 335 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 PEPDP12955 493 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 EIF3BP55884 814 aaKnown RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 GNB2P62879 340 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 YWHAZP63104 245 aaKnown RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 KCNMA1Q12791 1236 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 MAPK7Q13164 816 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 DHX34Q14147 1143 aaKnown RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 FGFBP1Q14512 234 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 SQLEQ14534 574 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 TRIP4Q15650 581 aaPredicted RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 ARTNQ5T4W7 220 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 CCDC183Q5T5S1 534 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 MAMDC4Q6UXC1 1216 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 RAPH1Q70E73 1250 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 ENOSF1Q7L5Y1 443 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 SLC46A3Q7Z3Q1 461 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 FERMT3Q86UX7 667 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 RBBP8NLQ8NC74 664 aaPredicted RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 OR6P1Q8NGX9 317 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 KIF18AQ8NI77 898 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 ASB15Q8WXK1 588 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 IRGQQ8WZA9 623 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 LARP4BQ92615 738 aaKnown RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 PNPLA2Q96AD5 504 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 ZUFSPQ96AP4 578 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 LRFN5Q96NI6 719 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 TAPBPLQ9BX59 468 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 RSPH9Q9H1X1 276 aaPredicted RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 METTL7AQ9H8H3 244 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 UPB1Q9UBR1 384 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 BACE2Q9Y5Z0 518 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 STON1Q9Y6Q2 735 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 MYH11P35749 1972 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 NSG1A0A0A6YYJ2 146 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 CCDC163A0A0D9SF12 145 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 HNRNPCL2B2RXH8 293 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 B8ZZF3 427 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 CDX4O14627 284 aaPredicted RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 B4GALT3O60512 393 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 HNRNPCL1O60812 293 aaKnown RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 CPNE3O75131 537 aaKnown RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 COQ9O75208 318 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 TCEA3O75764 348 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 PDHBP11177 359 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 H2AFXP16104 143 aaPredicted RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 IFNAR1P17181 557 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 EEF1B2P24534 225 aaKnown RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 VIPR2P41587 438 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 NSG1P42857 185 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 CCR4P51679 360 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 GTF2A1P52655 376 aaPredicted RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 TPD52P55327 224 aaPredicted RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 POLR2FP61218 127 aaKnown RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 COPZ1P61923 177 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 ECT2LQ008S8 904 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 PLOD1Q02809 727 aaPredicted RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 CHRFAM7AQ494W8 412 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 RAD9BQ6WBX8 426 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 SYT13Q7L8C5 426 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 GATAD2AQ86YP4 633 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 WDR75Q8IWA0 830 aaKnown RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 KIAA0319LQ8IZA0 1049 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 ADGRG2Q8IZP9 1017 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 THAP4Q8WY91 577 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 MARVELD3Q96A59 401 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 TRMT2BQ96GJ1 504 aaKnown RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 TGM7Q96PF1 710 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 PANX3Q96QZ0 392 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 RNF26Q9BY78 433 aaPredicted RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 BLZF1Q9H2G9 400 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 ACTR5Q9H9F9 607 aaPredicted RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 TRPV4Q9HBA0 871 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 ANKHQ9HCJ1 492 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 RIC8BQ9NVN3 520 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms