RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 SFTPCP11686 197 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 PTMSP20962 102 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 CSF2RBP32927 897 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 GARSP41250 739 aaKnown RBP16.06■□□□□ 0.16
COL18A1-205ENST00000423214 GPLD1P80108 840 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 DSC2Q02487 901 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 MMRN1Q13201 1228 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 LRP8Q14114 963 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 NFKBIBQ15653 356 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 NKAIN2Q5VXU1 208 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 ZNF574Q6ZN55 896 aaPredicted RBP16.06■□□□□ 0.16
COL18A1-205ENST00000423214 FAM129CQ86XR2 697 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 CBARPQ8N350 705 aaPredicted RBP16.06■□□□□ 0.16
COL18A1-205ENST00000423214 TEX26Q8N6G2 289 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 IL22RA1Q8N6P7 574 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 CPLX3Q8WVH0 158 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 ART4Q93070 314 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 SCAMP4Q969E2 229 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 ST14Q9Y5Y6 855 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 BSNQ9UPA5 3926 aa16.05■□□□□ 0.16
COL18A1-205ENST00000423214 MYO1FO00160 1098 aa16.05■□□□□ 0.16
COL18A1-205ENST00000423214 PPM1DO15297 605 aa16.05■□□□□ 0.16
COL18A1-205ENST00000423214 DUX1O43812 170 aa16.05■□□□□ 0.16
COL18A1-205ENST00000423214 FZD6O60353 706 aa16.05■□□□□ 0.16
COL18A1-205ENST00000423214 SERPING1P05155 500 aa16.05■□□□□ 0.16
COL18A1-205ENST00000423214 THRAP10827 490 aa16.05■□□□□ 0.16
COL18A1-205ENST00000423214 STC1P52823 247 aa16.05■□□□□ 0.16
COL18A1-205ENST00000423214 GALNT2Q10471 571 aa16.05■□□□□ 0.16
COL18A1-205ENST00000423214 IFI16Q16666 785 aaKnown RBP16.05■□□□□ 0.16
COL18A1-205ENST00000423214 PYCR3Q53H96 274 aa16.05■□□□□ 0.16
COL18A1-205ENST00000423214 NCBP2-AS2Q69YL0 99 aa16.05■□□□□ 0.16
COL18A1-205ENST00000423214 RFLNAQ6ZTI6 216 aa16.05■□□□□ 0.16
COL18A1-205ENST00000423214 LPCAT1Q8NF37 534 aa16.05■□□□□ 0.16
COL18A1-205ENST00000423214 OR10G6Q8NH81 332 aa16.05■□□□□ 0.16
COL18A1-205ENST00000423214 EXD1Q8NHP7 514 aa16.05■□□□□ 0.16
COL18A1-205ENST00000423214 SCARF2Q96GP6 870 aaPredicted RBP16.05■□□□□ 0.16
COL18A1-205ENST00000423214 SLC38A3Q99624 504 aa16.05■□□□□ 0.16
COL18A1-205ENST00000423214 TDRD1Q9BXT4 1180 aaKnown RBP16.05■□□□□ 0.16
COL18A1-205ENST00000423214 CHKBQ9Y259 395 aa16.05■□□□□ 0.16
COL18A1-205ENST00000423214 PLEKHM1Q9Y4G2 1056 aa16.05■□□□□ 0.16
COL18A1-205ENST00000423214 A0A1W2PQJ5 194 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 MATN3O15232 486 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 MAP3K6O95382 1288 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 CYP1A2P05177 515 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 CD48P09326 243 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 FGF3P11487 239 aaPredicted RBP16.04■□□□□ 0.16
COL18A1-205ENST00000423214 CES1P23141 567 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 MPSTP25325 297 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 PBX1P40424 430 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 FASLGP48023 281 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 RAB15P59190 212 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 CYP4F2P78329 520 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 PTSQ03393 145 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 KCNC4Q03721 635 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 DPYSL3Q14195 570 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 HGSNATQ68CP4 663 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 ALG1LQ6GMV1 187 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 ZNF761Q86XN6 746 aaPredicted RBP16.04■□□□□ 0.16
COL18A1-205ENST00000423214 NRSN1Q8IZ57 195 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 ZNF564Q8TBZ8 553 aaPredicted RBP16.04■□□□□ 0.16
COL18A1-205ENST00000423214 SLC37A2Q8TED4 501 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 MAML1Q92585 1016 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 SYN2Q92777 582 aaPredicted RBP16.04■□□□□ 0.16
COL18A1-205ENST00000423214 SMIM14Q96QK8 99 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 ZNF670Q9BS34 389 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 RIOK2Q9BVS4 552 aaKnown RBP16.04■□□□□ 0.16
COL18A1-205ENST00000423214 DDA1Q9BW61 102 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 TRIM4Q9C037 500 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 RBM22Q9NW64 420 aaKnown RBP eCLIP16.04■□□□□ 0.163e-6■□□□□ 10.9
COL18A1-205ENST00000423214 SLC39A1Q9NY26 324 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 IFNKQ9P0W0 207 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 VPS18Q9P253 973 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 AMACRQ9UHK6 382 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 PCDHGA3Q9Y5H0 932 aa16.04■□□□□ 0.16
COL18A1-205ENST00000423214 C1orf232A0A0U1RR37 186 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 EFCAB7A8K855 629 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 PPFIA2O75334 1257 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 WISP1O95388 367 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 SLC2A4P14672 509 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 WT1P19544 449 aaPredicted RBP16.03■□□□□ 0.16
COL18A1-205ENST00000423214 HHEXQ03014 270 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 PAFAH1B3Q15102 231 aaKnown RBP16.03■□□□□ 0.16
COL18A1-205ENST00000423214 TBR1Q16650 682 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 SKOR2Q2VWA4 1001 aaPredicted RBP16.03■□□□□ 0.16
COL18A1-205ENST00000423214 ZFYVE27Q5T4F4 411 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 ALKBH5Q6P6C2 394 aaKnown RBP16.03■□□□□ 0.16
COL18A1-205ENST00000423214 CHST15Q7LFX5 561 aaPredicted RBP16.03■□□□□ 0.16
COL18A1-205ENST00000423214 SFRP1Q8N474 314 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 KCTD6Q8NC69 237 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 HTR3CQ8WXA8 447 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 PMEPA1Q969W9 287 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 IQCDQ96DY2 449 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 COX14Q96I36 57 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 ZNF830Q96NB3 372 aaPredicted RBP16.03■□□□□ 0.16
COL18A1-205ENST00000423214 AGAP2Q99490 1192 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 ASPSCR1Q9BZE9 553 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 PCDH9Q9HC56 1237 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 STARD5Q9NSY2 213 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 PKD2L2Q9NZM6 624 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 TMEM9Q9P0T7 183 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms