RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 CA14Q9ULX7 337 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 RRP15Q9Y3B9 282 aaKnown RBP9.72□□□□□ -0.85
CMSS1-201ENST00000421999 NME7Q9Y5B8 376 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 IQCF5A8MTL0 148 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 FOXO6A8MYZ6 492 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 ABHD2P08910 425 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 VAV1P15498 845 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 SLC8A1P32418 973 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 NEK3P51956 506 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 GSCP56915 257 aaPredicted RBP9.71□□□□□ -0.85
CMSS1-201ENST00000421999 PLEKHG6Q3KR16 790 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 ZDHHC20Q5W0Z9 365 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 MIER2Q8N344 545 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 ZNF655Q8N720 491 aaPredicted RBP9.71□□□□□ -0.85
CMSS1-201ENST00000421999 TRPC4APQ8TEL6 797 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 SLCO2A1Q92959 643 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 ELOVL2Q9NXB9 296 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 POLG2Q9UHN1 485 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 PIGNO95427 931 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 IFNA16P05015 189 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 CXCR2P25025 360 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 NUDT2P50583 147 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 RAB10P61026 200 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 SEMA5AQ13591 1074 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 SHHQ15465 462 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 EML3Q32P44 896 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 TEDDM1Q5T9Z0 273 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 ZNF776Q68DI1 518 aaPredicted RBP9.71□□□□□ -0.85
CMSS1-201ENST00000421999 RSPO2Q6UXX9 243 aaPredicted RBP9.71□□□□□ -0.85
CMSS1-201ENST00000421999 KRT78Q8N1N4 520 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 TEX9Q8N6V9 391 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 EFCAB3Q8N7B9 438 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 NAT8LQ8N9F0 302 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 ZNF473Q8WTR7 871 aaKnown RBP9.71□□□□□ -0.85
CMSS1-201ENST00000421999 CENPIQ92674 756 aaPredicted RBP9.71□□□□□ -0.85
CMSS1-201ENST00000421999 FAM162AQ96A26 154 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 REPS1Q96D71 796 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 C1orf74Q96LT6 269 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 CAB39LQ9H9S4 337 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 USP3Q9Y6I4 520 aa9.71□□□□□ -0.85
CMSS1-201ENST00000421999 PLXNB2O15031 1838 aa9.71□□□□□ -0.86
CMSS1-201ENST00000421999 A0A087X1B8 175 aa9.71□□□□□ -0.86
CMSS1-201ENST00000421999 A0A1W2PPM1 405 aa9.71□□□□□ -0.86
CMSS1-201ENST00000421999 MYO1GB0I1T2 1018 aa9.71□□□□□ -0.86
CMSS1-201ENST00000421999 SLCO1B7G3V0H7 640 aa9.71□□□□□ -0.86
CMSS1-201ENST00000421999 NR5A2O00482 541 aa9.71□□□□□ -0.86
CMSS1-201ENST00000421999 AKAP10O43572 662 aa9.71□□□□□ -0.86
CMSS1-201ENST00000421999 ANXA11P50995 505 aaKnown RBP9.71□□□□□ -0.86
CMSS1-201ENST00000421999 AGKQ53H12 422 aa9.71□□□□□ -0.86
CMSS1-201ENST00000421999 RAB41Q5JT25 222 aa9.71□□□□□ -0.86
CMSS1-201ENST00000421999 TMEM220Q6QAJ8 160 aa9.71□□□□□ -0.86
CMSS1-201ENST00000421999 UBE2R2Q712K3 238 aaPredicted RBP9.71□□□□□ -0.86
CMSS1-201ENST00000421999 ZDHHC14Q8IZN3 488 aa9.71□□□□□ -0.86
CMSS1-201ENST00000421999 PCDH20Q8N6Y1 951 aaKnown RBP9.71□□□□□ -0.86
CMSS1-201ENST00000421999 GLMNQ92990 594 aa9.71□□□□□ -0.86
CMSS1-201ENST00000421999 RERGQ96A58 199 aaPredicted RBP9.71□□□□□ -0.86
CMSS1-201ENST00000421999 ING2Q9H160 280 aa9.71□□□□□ -0.86
CMSS1-201ENST00000421999 ANKRD6Q9Y2G4 727 aa9.71□□□□□ -0.86
CMSS1-201ENST00000421999 LCHNA4D1U4 455 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 UBDO15205 165 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 TPST1O60507 370 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 ALPIP09923 528 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 ALADP13716 330 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 CDH13P55290 713 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 LRRC32Q14392 662 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 RFTN1Q14699 578 aaPredicted RBP9.7□□□□□ -0.86
CMSS1-201ENST00000421999 CYP51A1Q16850 503 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 TRMT10BQ6PF06 316 aaKnown RBP9.7□□□□□ -0.86
CMSS1-201ENST00000421999 ENPP7Q6UWV6 458 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 NPWQ8N729 165 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 ICA1LQ8NDH6 482 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 FCRL5Q96RD9 977 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 MYCBPQ99417 103 aaPredicted RBP9.7□□□□□ -0.86
CMSS1-201ENST00000421999 RMND5AQ9H871 391 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 TMEM248Q9NWD8 314 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 DNAJC28Q9NX36 388 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 XPR1Q9UBH6 696 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 CD207Q9UJ71 328 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 LOXHD1Q8IVV2 1947 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 LINC01553A4QN01 128 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 RHPN2P1A8MT19 583 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 WNT9AO14904 365 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 SLC1A6P48664 564 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 BLKP51451 505 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 SCAPQ12770 1279 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 HOMEZQ8IX15 550 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 MPP5Q8N3R9 675 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 ACE2Q9BYF1 805 aaPredicted RBP9.7□□□□□ -0.86
CMSS1-201ENST00000421999 RHOJQ9H4E5 214 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 CARS2Q9HA77 564 aaKnown RBP9.7□□□□□ -0.86
CMSS1-201ENST00000421999 TMEM30AQ9NV96 361 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 SLC12A4Q9UP95 1085 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 PIAS3Q9Y6X2 628 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 DCLK1O15075 740 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 UGT1A9O60656 530 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 WDR47O94967 919 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 KAT7O95251 611 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 UGT1A6P19224 532 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 UGT1A1P22309 533 aa9.7□□□□□ -0.86
CMSS1-201ENST00000421999 UGT1A4P22310 534 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms