RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 NFKB2Q00653 900 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 BNC1Q01954 994 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 SLC20A2Q08357 652 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 CNTN1Q12860 1018 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 UAP1L1Q3KQV9 507 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 PARP15Q460N3 678 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 TMEM177Q53S58 311 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 PPP6R3Q5H9R7 873 aaPredicted RBP7.02□□□□□ -1.29
HMGN1-205ENST00000419378 CCDC122Q5T0U0 273 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 ERMARDQ5T6L9 678 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 ALKBH5Q6P6C2 394 aaKnown RBP7.02□□□□□ -1.29
HMGN1-205ENST00000419378 SARM1Q6SZW1 724 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.02□□□□□ -1.29
HMGN1-205ENST00000419378 LEKR1Q6ZMV7 388 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 DPY19L3Q6ZPD9 716 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 STRA8Q7Z7C7 330 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 ZNF354CQ86Y25 554 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 LILRA2Q8N149 483 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 UMODL1-AS1Q8N2C9 162 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 MINDY1Q8N5J2 469 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 CISD2Q8N5K1 135 aaKnown RBP7.02□□□□□ -1.29
HMGN1-205ENST00000419378 TMIEQ8NEW7 156 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 OR8K1Q8NGG5 319 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 OR2I1PQ8NGU4 316 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 OR14C36Q8NHC7 312 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 ARHGEF26Q96DR7 871 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 HMCESQ96FZ2 354 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 EIF3CQ99613 913 aaKnown RBP7.02□□□□□ -1.29
HMGN1-205ENST00000419378 NCAPGQ9BPX3 1015 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 NUP85Q9BW27 656 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 TM6SF2Q9BZW4 377 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 ZDHHC5Q9C0B5 715 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 KLC2Q9H0B6 622 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 DHX35Q9H5Z1 703 aaKnown RBP7.02□□□□□ -1.29
HMGN1-205ENST00000419378 TM9SF3Q9HD45 589 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 ABHD10Q9NUJ1 306 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 IL36AQ9UHA7 158 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 ADGRE2Q9UHX3 823 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 ANAPC7Q9UJX3 599 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 CBLCQ9ULV8 474 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 HPCAL4Q9UM19 191 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 COA3Q9Y2R0 106 aaPredicted RBP7.02□□□□□ -1.29
HMGN1-205ENST00000419378 PLXNA2O75051 1894 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 A0A1B0GVT2 93 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 A0A1W2PPC4 97 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 ZSCAN5CA6NGD5 496 aaPredicted RBP7.01□□□□□ -1.29
HMGN1-205ENST00000419378 RASA4BC9J798 803 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 GSTA4O15217 222 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 RASA4O43374 803 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 LATO43561 262 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 OPHN1O60890 802 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 TMCC1O94876 653 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 GSRP00390 522 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 CYP1A2P05177 515 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 TPM1P09493 284 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 COL6A2P12110 1019 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 IL1R2P27930 398 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 CSNK1EP49674 416 aaKnown RBP7.01□□□□□ -1.29
HMGN1-205ENST00000419378 CCR5P51681 352 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 ADKP55263 362 aaKnown RBP7.01□□□□□ -1.29
HMGN1-205ENST00000419378 YBEYP58557 167 aaPredicted RBP7.01□□□□□ -1.29
HMGN1-205ENST00000419378 TAS2R38P59533 333 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 DPYSQ14117 519 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 PIGHQ14442 188 aaPredicted RBP7.01□□□□□ -1.29
HMGN1-205ENST00000419378 ACAP1Q15027 740 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 DPYSL2Q16555 572 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 SLC18A3Q16572 532 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 SMTNL2Q2TAL5 461 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 ASTE1Q2TB18 679 aaPredicted RBP7.01□□□□□ -1.29
HMGN1-205ENST00000419378 CARD16Q5EG05 197 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 KCNT1Q5JUK3 1230 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 PIP5KL1Q5T9C9 394 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 MROH9Q5TGP6 573 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 BICRALQ6AI39 1079 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 TXNRD3NBQ6F5E7 133 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 LAYNQ6UX15 382 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 RFX8Q6ZV50 586 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 PSTKQ8IV42 348 aaKnown RBP7.01□□□□□ -1.29
HMGN1-205ENST00000419378 RYBPQ8N488 228 aaPredicted RBP7.01□□□□□ -1.29
HMGN1-205ENST00000419378 NPWQ8N729 165 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 NIPA2Q8N8Q9 360 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 OR6K2Q8NGY2 324 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 ZNF564Q8TBZ8 553 aaPredicted RBP7.01□□□□□ -1.29
HMGN1-205ENST00000419378 ISG20Q96AZ6 181 aaKnown RBP7.01□□□□□ -1.29
HMGN1-205ENST00000419378 ARRDC3Q96B67 414 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 PPP1R16AQ96I34 528 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 CELF6Q96J87 481 aaKnown RBP7.01□□□□□ -1.29
HMGN1-205ENST00000419378 PACSIN1Q9BY11 444 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 DEF6Q9H4E7 631 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 EPB41L1Q9H4G0 881 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 ZDHHC6Q9H6R6 413 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 LRRC19Q9H756 370 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 EBF2Q9HAK2 575 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 PDFQ9HBH1 243 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 DYRK4Q9NR20 520 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 ZNHIT6Q9NWK9 470 aaKnown RBP7.01□□□□□ -1.29
HMGN1-205ENST00000419378 HECAQ9UBI9 543 aaPredicted RBP7.01□□□□□ -1.29
HMGN1-205ENST00000419378 IP6K2Q9UHH9 426 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 CEP295Q9C0D2 2601 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 KNL1Q8NG31 2342 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms