RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 CCL4L1Q8NHW4 92 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 NAT6Q93015 286 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 SCARF2Q96GP6 870 aaPredicted RBP20.21■□□□□ 0.83
GTF3A-202ENST00000419181 COX14Q96I36 57 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 HIC2Q96JB3 615 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 FAM118BQ9BPY3 351 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 FAM83DQ9H4H8 585 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 TRNAU1APQ9NX07 287 aaKnown RBP20.21■□□□□ 0.83
GTF3A-202ENST00000419181 SIRPGQ9P1W8 387 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 PADI4Q9UM07 663 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 SUFUQ9UMX1 484 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 SHOC2Q9UQ13 582 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 APC2O95996 2303 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 ZZEF1O43149 2961 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 TRABD2BA6NFA1 517 aa20.2■□□□□ 0.82
GTF3A-202ENST00000419181 F5H423 210 aaPredicted RBP20.2■□□□□ 0.82
GTF3A-202ENST00000419181 KRT86O43790 486 aa20.2■□□□□ 0.82
GTF3A-202ENST00000419181 PERM1Q5SV97 790 aa20.2■□□□□ 0.82
GTF3A-202ENST00000419181 DOK6Q6PKX4 331 aa20.2■□□□□ 0.82
GTF3A-202ENST00000419181 TMC3Q7Z5M5 1100 aa20.2■□□□□ 0.82
GTF3A-202ENST00000419181 TRIM74Q86UV6 250 aa20.2■□□□□ 0.82
GTF3A-202ENST00000419181 LRRC8AQ8IWT6 810 aa20.2■□□□□ 0.82
GTF3A-202ENST00000419181 MAPK15Q8TD08 544 aa20.2■□□□□ 0.82
GTF3A-202ENST00000419181 GPBAR1Q8TDU6 330 aa20.2■□□□□ 0.82
GTF3A-202ENST00000419181 MRGPRX2Q96LB1 330 aa20.2■□□□□ 0.82
GTF3A-202ENST00000419181 SRPK1Q96SB4 655 aaKnown RBP20.2■□□□□ 0.82
GTF3A-202ENST00000419181 FERMT1Q9BQL6 677 aa20.2■□□□□ 0.82
GTF3A-202ENST00000419181 GBA3Q9H227 469 aa20.2■□□□□ 0.82
GTF3A-202ENST00000419181 NFKBIL1Q9UBC1 381 aaPredicted RBP20.2■□□□□ 0.82
GTF3A-202ENST00000419181 GULP1Q9UBP9 304 aa20.2■□□□□ 0.82
GTF3A-202ENST00000419181 RSPH14Q9UHP6 348 aa20.2■□□□□ 0.82
GTF3A-202ENST00000419181 GUCA1BQ9UMX6 200 aa20.2■□□□□ 0.82
GTF3A-202ENST00000419181 SPO11Q9Y5K1 396 aa20.2■□□□□ 0.82
GTF3A-202ENST00000419181 ACACAQ13085 2346 aa20.2■□□□□ 0.82
GTF3A-202ENST00000419181 FADS2P1A8MWK0 482 aa20.19■□□□□ 0.82
GTF3A-202ENST00000419181 INPP4BO15327 924 aa20.19■□□□□ 0.82
GTF3A-202ENST00000419181 MT-CO3P00414 261 aa20.19■□□□□ 0.82
GTF3A-202ENST00000419181 GNPDA1P46926 289 aa20.19■□□□□ 0.82
GTF3A-202ENST00000419181 DCDC1P59894 354 aa20.19■□□□□ 0.82
GTF3A-202ENST00000419181 KLF1Q13351 362 aaPredicted RBP20.19■□□□□ 0.82
GTF3A-202ENST00000419181 MPP3Q13368 585 aa20.19■□□□□ 0.82
GTF3A-202ENST00000419181 ITPRIPL1Q6GPH6 555 aa20.19■□□□□ 0.82
GTF3A-202ENST00000419181 OGFOD3Q6PK18 319 aa20.19■□□□□ 0.82
GTF3A-202ENST00000419181 NRROSQ86YC3 692 aa20.19■□□□□ 0.82
GTF3A-202ENST00000419181 GPR26Q8NDV2 337 aa20.19■□□□□ 0.82
GTF3A-202ENST00000419181 FAM46DQ8NEK8 389 aa20.19■□□□□ 0.82
GTF3A-202ENST00000419181 GPR156Q8NFN8 814 aa20.19■□□□□ 0.82
GTF3A-202ENST00000419181 GORASP1Q9BQQ3 440 aa20.19■□□□□ 0.82
GTF3A-202ENST00000419181 GPR63Q9BZJ6 419 aa20.19■□□□□ 0.82
GTF3A-202ENST00000419181 CDH19Q9H159 772 aa20.19■□□□□ 0.82
GTF3A-202ENST00000419181 ABCG4Q9H172 646 aa20.19■□□□□ 0.82
GTF3A-202ENST00000419181 CCDC86Q9H6F5 360 aaKnown RBP20.19■□□□□ 0.82
GTF3A-202ENST00000419181 SUDS3Q9H7L9 328 aaPredicted RBP20.19■□□□□ 0.82
GTF3A-202ENST00000419181 DKK4Q9UBT3 224 aa20.19■□□□□ 0.82
GTF3A-202ENST00000419181 CNOT6Q9ULM6 557 aaKnown RBP20.19■□□□□ 0.82
GTF3A-202ENST00000419181 TMEM98Q9Y2Y6 226 aa20.19■□□□□ 0.82
GTF3A-202ENST00000419181 SRRM3A6NNA2 597 aaPredicted RBP20.18■□□□□ 0.82
GTF3A-202ENST00000419181 KCNN4O15554 427 aa20.18■□□□□ 0.82
GTF3A-202ENST00000419181 NOBOXO60393 691 aa20.18■□□□□ 0.82
GTF3A-202ENST00000419181 SLC4A1P02730 911 aa20.18■□□□□ 0.82
GTF3A-202ENST00000419181 CHRNA4P43681 627 aa20.18■□□□□ 0.82
GTF3A-202ENST00000419181 ILF3Q12906 894 aaKnown RBP eCLIP20.18■□□□□ 0.82
GTF3A-202ENST00000419181 SLC1A5Q15758 541 aa20.18■□□□□ 0.82
GTF3A-202ENST00000419181 SIRPB2Q5JXA9 342 aa20.18■□□□□ 0.82
GTF3A-202ENST00000419181 DARS2Q6PI48 645 aaKnown RBP20.18■□□□□ 0.82
GTF3A-202ENST00000419181 TTC13Q8NBP0 860 aa20.18■□□□□ 0.82
GTF3A-202ENST00000419181 IPMKQ8NFU5 416 aa20.18■□□□□ 0.82
GTF3A-202ENST00000419181 MDM1Q8TC05 714 aa20.18■□□□□ 0.82
GTF3A-202ENST00000419181 GSDMCQ9BYG8 508 aa20.18■□□□□ 0.82
GTF3A-202ENST00000419181 RAD18Q9NS91 495 aa20.18■□□□□ 0.82
GTF3A-202ENST00000419181 VPS18Q9P253 973 aa20.18■□□□□ 0.82
GTF3A-202ENST00000419181 ST14Q9Y5Y6 855 aa20.18■□□□□ 0.82
GTF3A-202ENST00000419181 ZFC3H1O60293 1989 aaKnown RBP20.17■□□□□ 0.82
GTF3A-202ENST00000419181 PKD1L2Q7Z442 2459 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 GOLGA6L9A6NEM1 432 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 AURKAO14965 403 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 STK10O94804 968 aaKnown RBP20.17■□□□□ 0.82
GTF3A-202ENST00000419181 HLA-DPA1P20036 260 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 ADCY8P40145 1251 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 PYCR3Q53H96 274 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 ANKRD20A2Q5SQ80 823 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 ANKRD20A1Q5TYW2 823 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 ANKRD20A3Q5VUR7 823 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 ZNF662Q6ZS27 426 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 PROSER1Q86XN7 944 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 SFTPA2Q8IWL1 248 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 UBE2Q2Q8WVN8 375 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 SPATA13Q96N96 652 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 OR2M4Q96R27 311 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 CCDC3Q9BQI4 270 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 FSD1LQ9BXM9 530 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 DPEP2Q9H4A9 486 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 TRABDQ9H4I3 376 aa20.17■□□□□ 0.82
GTF3A-202ENST00000419181 OAS3Q9Y6K5 1087 aaKnown RBP20.17■□□□□ 0.82
GTF3A-202ENST00000419181 B4DGG1 531 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 TAF4O00268 1085 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 ZNF189O75820 626 aaPredicted RBP20.16■□□□□ 0.82
GTF3A-202ENST00000419181 ANXA9O76027 345 aa20.16■□□□□ 0.82
GTF3A-202ENST00000419181 ATP1A1P05023 1023 aaKnown RBP20.16■□□□□ 0.82
GTF3A-202ENST00000419181 PTMAP06454 111 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms