RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CHMP4AQ9BY43 222 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 SDF2L1Q9HCN8 221 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 AASSQ9UDR5 926 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 RALYQ9UKM9 306 aaKnown RBP4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 PADI1Q9ULC6 663 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 ICAM5Q9UMF0 924 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 OR2W1Q9Y3N9 320 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 LOXL2Q9Y4K0 774 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 PCDHAC2Q9Y5I4 1007 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 CLIC4Q9Y696 253 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 AKR1B15C9JRZ8 316 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 TNFAIP3P21580 790 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 DGKAP23743 735 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 MAPK4P31152 587 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 CLDN20P56880 219 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 TAS2R38P59533 333 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 FOXD4Q12950 439 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 CCDC96Q2M329 555 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 GPATCH4Q5T3I0 446 aaKnown RBP4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 LRIF1Q5T3J3 769 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 FRG2Q64ET8 278 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 BRAT1Q6PJG6 821 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 KRBA2Q6ZNG9 492 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 CLEC17AQ6ZS10 378 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 CPLX4Q7Z7G2 160 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 UCMAQ8WVF2 138 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 FAM149B1Q96BN6 582 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 ARHGEF26Q96DR7 871 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 UNC45AQ9H3U1 944 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 PDZD7Q9H5P4 517 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 RANGRFQ9HD47 186 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 DLGAP2Q9P1A6 1054 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 ORC3Q9UBD5 711 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 LIMA1Q9UHB6 759 aaKnown RBP4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 ACSL5Q9ULC5 683 aa4.36□□□□□ -1.71
HMGB1P49-201ENST00000418882 GOLGA6L9A6NEM1 432 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 BMPR1BO00238 502 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 ATP2A1O14983 1001 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 TIPRLO75663 272 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 CAMTA2O94983 1202 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 UMODP07911 640 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 KRT32Q14532 448 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 DECR1Q16698 335 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 SNX30Q5VWJ9 437 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 FAM122CQ6P4D5 195 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 Q6ZTC4 211 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 SEPT14Q6ZU15 432 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 FOXL2NBQ6ZUU3 175 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 USP43Q70EL4 1123 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 FRMD1Q8N878 549 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 SLC44A1Q8WWI5 657 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 DNASE2BQ8WZ79 361 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 CD101Q93033 1021 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 SMARCE1Q969G3 411 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 ZKSCAN4Q969J2 545 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 MPP4Q96JB8 637 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 TMEM68Q96MH6 324 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 NODALQ96S42 347 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 ITPAQ9BY32 194 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 PIGMQ9H3S5 423 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 PLEKHA5Q9HAU0 1116 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 SMC4Q9NTJ3 1288 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 IRAK4Q9NWZ3 460 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 COPG2Q9UBF2 871 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 AMDHD2Q9Y303 409 aa4.35□□□□□ -1.71
HMGB1P49-201ENST00000418882 LILRA5A6NI73 299 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 M0QZ24 198 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 SPINT2O43291 252 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 EPB41L2O43491 1005 aaKnown RBP4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 KRT36O76013 467 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 IGLV2-11P01706 119 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 AMD1P17707 334 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 RRM1P23921 792 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 HOXC9P31274 260 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 MAN1A1P33908 653 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 PDE1BQ01064 536 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 FOXM1Q08050 763 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 HAUS3Q68CZ6 603 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 LCN10Q6JVE6 187 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 FAM180BQ6P0A1 224 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 ASB18Q6ZVZ8 466 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 CACNA2D4Q7Z3S7 1137 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 ZNF329Q86UD4 541 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 TMPRSS12Q86WS5 348 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 ANKRD52Q8NB46 1076 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 SLC38A5Q8WUX1 472 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 TAAR8Q969N4 342 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 EGLN2Q96KS0 407 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 PDCL3Q9H2J4 239 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 MAU2Q9Y6X3 613 aa4.34□□□□□ -1.71
HMGB1P49-201ENST00000418882 ARHGEF40Q8TER5 1519 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 PTPRCP08575 1304 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 A0A1W2PP11 408 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 LIPT2A6NK58 231 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 FAM90A26D6RGX4 464 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 USO1O60763 962 aaKnown RBP4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 IPO7O95373 1038 aaKnown RBP4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 EIF2S1P05198 315 aaKnown RBP4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 ICAM1P05362 532 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 MCM3P25205 808 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms