RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 NSMCE3Q96MG7 304 aa11.29□□□□□ -0.6
SNX30-202ENST00000416585 ZNF830Q96NB3 372 aaPredicted RBP11.29□□□□□ -0.6
SNX30-202ENST00000416585 TEFMQ96QE5 360 aaKnown RBP11.29□□□□□ -0.6
SNX30-202ENST00000416585 EFHD1Q9BUP0 239 aa11.29□□□□□ -0.6
SNX30-202ENST00000416585 NUP85Q9BW27 656 aa11.29□□□□□ -0.6
SNX30-202ENST00000416585 TRIM4Q9C037 500 aa11.29□□□□□ -0.6
SNX30-202ENST00000416585 THAP2Q9H0W7 228 aa11.29□□□□□ -0.6
SNX30-202ENST00000416585 PKD2L2Q9NZM6 624 aa11.29□□□□□ -0.6
SNX30-202ENST00000416585 AMACRQ9UHK6 382 aa11.29□□□□□ -0.6
SNX30-202ENST00000416585 ZNF462Q96JM2 2506 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 TRBV23OR9-2A0A075B6M9 112 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 A0A1B0GTH6 734 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 PPM1DO15297 605 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 MFSD11O43934 449 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 PEX11BO96011 259 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 PDHA1P08559 390 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 FGF3P11487 239 aaPredicted RBP11.28□□□□□ -0.6
SNX30-202ENST00000416585 TCF4P15884 667 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 MPSTP25325 297 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 GARSP41250 739 aaKnown RBP11.28□□□□□ -0.6
SNX30-202ENST00000416585 FASLGP48023 281 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 CYP4F2P78329 520 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 DSC2Q02487 901 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 HHEXQ03014 270 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 PYCR3Q53H96 274 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 FIGNQ5HY92 759 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 CEACAM20Q6UY09 585 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 ZNF574Q6ZN55 896 aaPredicted RBP11.28□□□□□ -0.6
SNX30-202ENST00000416585 CHST15Q7LFX5 561 aaPredicted RBP11.28□□□□□ -0.6
SNX30-202ENST00000416585 KDELC2Q7Z4H8 507 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 TECPR1Q7Z6L1 1165 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 SLC9B2Q86UD5 537 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 RAVER1Q8IY67 606 aaKnown RBP11.28□□□□□ -0.6
SNX30-202ENST00000416585 KCTD6Q8NC69 237 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 SLC37A2Q8TED4 501 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 PIH1D2Q8WWB5 315 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 SCAMP4Q969E2 229 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 NKD1Q969G9 470 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 BTBD6Q96KE9 485 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 CATSPER2Q96P56 530 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 ANP32EQ9BTT0 268 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 RIOK2Q9BVS4 552 aaKnown RBP11.28□□□□□ -0.6
SNX30-202ENST00000416585 TDRD1Q9BXT4 1180 aaKnown RBP11.28□□□□□ -0.6
SNX30-202ENST00000416585 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.28□□□□□ -0.6
SNX30-202ENST00000416585 ADNPQ9H2P0 1102 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 RMI1Q9H9A7 625 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 RBM22Q9NW64 420 aaKnown RBP eCLIP11.28□□□□□ -0.6
SNX30-202ENST00000416585 VPS18Q9P253 973 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 CHKBQ9Y259 395 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 PPIL1Q9Y3C6 166 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 PCDHGA3Q9Y5H0 932 aa11.28□□□□□ -0.6
SNX30-202ENST00000416585 C1orf232A0A0U1RR37 186 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 ZNF891A8MT65 544 aaPredicted RBP11.27□□□□□ -0.61
SNX30-202ENST00000416585 A8MU76 341 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 MATN3O15232 486 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 CAPN5O15484 640 aaPredicted RBP11.27□□□□□ -0.61
SNX30-202ENST00000416585 ARHGAP6O43182 974 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 RAD1O60671 282 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 SNX2O60749 519 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 MTA2O94776 668 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 MAP3K6O95382 1288 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 FUCA1P04066 466 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 SERPING1P05155 500 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 LIFP15018 202 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 MX2P20592 715 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 CCNCP24863 283 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 CSF2RBP32927 897 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 UGT1A3P35503 534 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 CCR10P46092 362 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 STC1P52823 247 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 RPL26P61254 145 aaKnown RBP11.27□□□□□ -0.61
SNX30-202ENST00000416585 NFKB2Q00653 900 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 SLC25A11Q02978 314 aaKnown RBP11.27□□□□□ -0.61
SNX30-202ENST00000416585 GALNT2Q10471 571 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 MMRN1Q13201 1228 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 NFATC2Q13469 925 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 PDK2Q15119 407 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 ODF2Q5BJF6 829 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 ANKRD20A8PQ5CZ79 823 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 E4F1Q66K89 784 aaPredicted RBP11.27□□□□□ -0.61
SNX30-202ENST00000416585 NLRP8Q86W28 1048 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 ZNF761Q86XN6 746 aaPredicted RBP11.27□□□□□ -0.61
SNX30-202ENST00000416585 PHYKPLQ8IUZ5 450 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 CBARPQ8N350 705 aaPredicted RBP11.27□□□□□ -0.61
SNX30-202ENST00000416585 TEX26Q8N6G2 289 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 CCNYQ8ND76 341 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 ZNF564Q8TBZ8 553 aaPredicted RBP11.27□□□□□ -0.61
SNX30-202ENST00000416585 PTCD2Q8WV60 388 aaKnown RBP11.27□□□□□ -0.61
SNX30-202ENST00000416585 COL26A1Q96A83 441 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 IQCDQ96DY2 449 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 SCARF2Q96GP6 870 aaPredicted RBP11.27□□□□□ -0.61
SNX30-202ENST00000416585 ZPBPQ9BS86 351 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 HERPUD2Q9BSE4 406 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 ADGRE3Q9BY15 652 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 SLC25A18Q9H1K4 315 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 GPN2Q9H9Y4 310 aaPredicted RBP11.27□□□□□ -0.61
SNX30-202ENST00000416585 PCDH9Q9HC56 1237 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 STARD5Q9NSY2 213 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 IL17BQ9UHF5 180 aa11.27□□□□□ -0.61
SNX30-202ENST00000416585 LCMT1Q9UIC8 334 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms