RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 TBC1D3CQ6IPX1 549 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 TSSK4Q6SA08 328 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 AFTPHQ6ULP2 937 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 MICALCLQ6ZW33 695 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 SNX20Q7Z614 316 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 FAM124AQ86V42 546 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 PIANPQ8IYJ0 282 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 TBC1D3Q8IZP1 549 aaPredicted RBP13.22□□□□□ -0.29
CNN3-203ENST00000415017 PELI3Q8N2H9 469 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 FAM160A2Q8N612 972 aaPredicted RBP13.22□□□□□ -0.29
CNN3-203ENST00000415017 ZBTB44Q8NCP5 570 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 DENND6BQ8NEG7 585 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 OR4L1Q8NH43 312 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 FBF1Q8TES7 1133 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 RLN3Q8WXF3 142 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 SCAMP4Q969E2 229 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 CFAP36Q96G28 342 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 VPS35Q96QK1 796 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 AGAP2Q99490 1192 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 DHRS4Q9BTZ2 278 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 ZSCAN5AQ9BUG6 496 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 C6orf106Q9H6K1 298 aaPredicted RBP13.22□□□□□ -0.29
CNN3-203ENST00000415017 CNOT6Q9ULM6 557 aaKnown RBP13.22□□□□□ -0.29
CNN3-203ENST00000415017 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.22□□□□□ -0.29
CNN3-203ENST00000415017 COQ6Q9Y2Z9 468 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 NFS1Q9Y697 457 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 A0A087WUV0 522 aaPredicted RBP13.21□□□□□ -0.29
CNN3-203ENST00000415017 CCDC78A2IDD5 438 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 CCL22O00626 93 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 ACSL3O95573 720 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 GOT2P00505 430 aaKnown RBP13.21□□□□□ -0.29
CNN3-203ENST00000415017 OGNP20774 298 aaKnown RBP13.21□□□□□ -0.29
CNN3-203ENST00000415017 MC4RP32245 332 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 STX2P32856 288 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 PHBP35232 272 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 FNTBP49356 437 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 TMPRSS15P98073 1019 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 CACNG1Q06432 222 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 MGAT5Q09328 741 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 NFATC2Q13469 925 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 SEMA3AQ14563 771 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 CHRNA6Q15825 494 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 ATP13A5Q4VNC0 1218 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 NEPROQ6NW34 567 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 SLC36A4Q6YBV0 504 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 MARK2Q7KZI7 788 aaKnown RBP13.21□□□□□ -0.29
CNN3-203ENST00000415017 KCNMB4Q86W47 210 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 TMEM145Q8NBT3 493 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 C1orf216Q8TAB5 229 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 BIRC7Q96CA5 298 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 AP2M1Q96CW1 435 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 NUS1Q96E22 293 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 COX14Q96I36 57 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 TCF12Q99081 682 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 TMEM109Q9BVC6 243 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 RIOK2Q9BVS4 552 aaKnown RBP13.21□□□□□ -0.29
CNN3-203ENST00000415017 GPR174Q9BXC1 333 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 DUSP15Q9H1R2 295 aaPredicted RBP13.21□□□□□ -0.29
CNN3-203ENST00000415017 GPR27Q9NS67 375 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 EURLQ9NYK6 297 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 MARCH4Q9P2E8 410 aaPredicted RBP13.21□□□□□ -0.29
CNN3-203ENST00000415017 DMTF1Q9Y222 760 aa13.21□□□□□ -0.29
CNN3-203ENST00000415017 TP53BP1Q12888 1972 aaPredicted RBP13.21□□□□□ -0.29
CNN3-203ENST00000415017 WDFY4Q6ZS81 3184 aa13.21□□□□□ -0.3
CNN3-203ENST00000415017 OR51F1A6NGY5 319 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 FADS2P1A8MWK0 482 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 CXorf49A8MYA2 514 aaPredicted RBP13.2□□□□□ -0.3
CNN3-203ENST00000415017 K7ESM1 405 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 RAD51BO15315 384 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 CD3EAPO15446 510 aaKnown RBP13.2□□□□□ -0.3
CNN3-203ENST00000415017 LZTS3O60299 673 aaPredicted RBP13.2□□□□□ -0.3
CNN3-203ENST00000415017 LILRB5O75023 590 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 PRAMEF1O95521 474 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 PAK4O96013 591 aaPredicted RBP13.2□□□□□ -0.3
CNN3-203ENST00000415017 PYGLP06737 847 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 HOXC4P09017 264 aaPredicted RBP13.2□□□□□ -0.3
CNN3-203ENST00000415017 ERVK-10P10266 1014 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 BCKDHBP21953 392 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 GABRB3P28472 473 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 GCAP28676 217 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 CNR2P34972 360 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 LEPRP48357 1165 aaKnown RBP13.2□□□□□ -0.3
CNN3-203ENST00000415017 CDKN1CP49918 316 aaPredicted RBP13.2□□□□□ -0.3
CNN3-203ENST00000415017 ADARP55265 1226 aaKnown RBP13.2□□□□□ -0.3
CNN3-203ENST00000415017 PRAMEP78395 509 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 CSTF1Q05048 431 aaKnown RBP13.2□□□□□ -0.3
CNN3-203ENST00000415017 NAB1Q13506 487 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 ITGA9Q13797 1035 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 RASA2Q15283 850 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 KBTBD12Q3ZCT8 623 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 HSP90AA5PQ58FG0 334 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 PSAPL1Q6NUJ1 521 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 PNCKQ6P2M8 343 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 ADAMTSL4Q6UY14 1074 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 KIAA0408Q6ZU52 694 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 SLC26A11Q86WA9 606 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 CILP2Q8IUL8 1156 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 SLC41A1Q8IVJ1 513 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 PLA2G15Q8NCC3 412 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 C2CD4AQ8NCU7 369 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms