RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 THAP1Q9NVV9 213 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 KIF1BO60333 1816 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 MAGEC1O60732 1142 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 FGBP02675 491 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 CCKBRP32239 447 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 MOXD1Q6UVY6 613 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 CYP2S1Q96SQ9 504 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 ZSCAN5AQ9BUG6 496 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.44■□□□□ 0.547e-7■■■■□ 20.3
SHANK3-202ENST00000414786 SPATA31A1Q5TZJ5 1347 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 DDX6P26196 483 aaKnown RBP eCLIP18.44■□□□□ 0.542e-6■■■■■ 34.6
SHANK3-202ENST00000414786 MEA1Q16626 185 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 ABRAXAS1Q6UWZ7 409 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 SPERTQ8NA61 448 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 IRF2BPLQ9H1B7 796 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 SEC14L3Q9UDX4 400 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 ZNF490Q9ULM2 529 aaPredicted RBP18.44■□□□□ 0.54
SHANK3-202ENST00000414786 THAP5Q7Z6K1 395 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 CITED4Q96RK1 184 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 MALT1Q9UDY8 824 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 A0A1W2PQJ5 194 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 DLG4P78352 724 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 PLEKHG4Q58EX7 1191 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 ZNF627Q7L945 461 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 TTC29Q8NA56 475 aaPredicted RBP18.44■□□□□ 0.54
SHANK3-202ENST00000414786 TDRD1Q9BXT4 1180 aaKnown RBP18.44■□□□□ 0.54
SHANK3-202ENST00000414786 FRMD8P1Q9BZ68 369 aaPredicted RBP18.44■□□□□ 0.54
SHANK3-202ENST00000414786 TMBIM4Q9HC24 238 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 DNAJC28Q9NX36 388 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 UMODL1Q5DID0 1318 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 RPTORQ8N122 1335 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 ARCN1P48444 511 aaKnown RBP18.43■□□□□ 0.54
SHANK3-202ENST00000414786 SNAPC1Q16533 368 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 PSTKQ8IV42 348 aaKnown RBP18.43■□□□□ 0.54
SHANK3-202ENST00000414786 WDR77Q9BQA1 342 aaPredicted RBP18.43■□□□□ 0.54
SHANK3-202ENST00000414786 DEC1Q9P2X7 70 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 SERPINB7O75635 380 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 CACNG4Q9UBN1 327 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 TNS3Q68CZ2 1445 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 ALPPL2P10696 532 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 IFI35P80217 286 aaPredicted RBP18.43■□□□□ 0.54
SHANK3-202ENST00000414786 NDUFA9Q16795 377 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 GPRIN3Q6ZVF9 776 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 DNERQ8NFT8 737 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 EFHD2Q96C19 240 aaPredicted RBP18.43■□□□□ 0.54
SHANK3-202ENST00000414786 SEC61A2Q9H9S3 476 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 GPR107Q5VW38 600 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 GRHL3Q8TE85 626 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 LENG1Q96BZ8 264 aaPredicted RBP18.43■□□□□ 0.54
SHANK3-202ENST00000414786 FAM237BA0A1B0GVD1 139 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 C9JVG2 144 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 GRM6O15303 877 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 DLG2Q15700 870 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 ZNF34Q8IZ26 560 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 POU2F3Q9UKI9 436 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 PER2O15055 1255 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 CSH1P0DML2 217 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 CSH2P0DML3 217 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 NPR3P17342 541 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 CDKN1CP49918 316 aaPredicted RBP18.43■□□□□ 0.54
SHANK3-202ENST00000414786 RNF144AP50876 292 aaPredicted RBP18.43■□□□□ 0.54
SHANK3-202ENST00000414786 HJURPQ8NCD3 748 aaPredicted RBP18.43■□□□□ 0.54
SHANK3-202ENST00000414786 ZNF518BQ9C0D4 1074 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 MYO10Q9HD67 2058 aa18.43■□□□□ 0.54
SHANK3-202ENST00000414786 CBLP22681 906 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 PTPN4P29074 926 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 SLC7A1P30825 629 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 SREBF1P36956 1147 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 PPP3R1P63098 170 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 DPYSL3Q14195 570 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 RBM39Q14498 530 aaKnown RBP18.42■□□□□ 0.54
SHANK3-202ENST00000414786 NAIF1Q69YI7 327 aaPredicted RBP18.42■□□□□ 0.54
SHANK3-202ENST00000414786 BTBD10Q9BSF8 475 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 FAM205AQ6ZU69 1335 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 WNT10BO00744 389 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 PTPN9P43378 593 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 HBEGFQ99075 208 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 NR4A1P22736 598 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 SEPHS1P49903 392 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 RHBDF2Q6PJF5 856 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 DGKBQ9Y6T7 804 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 BAZ2BQ9UIF8 2168 aaKnown RBP18.42■□□□□ 0.54
SHANK3-202ENST00000414786 TRBC1P01850 177 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 ECHS1P30084 290 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 TTPAP49638 278 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 RPL14P50914 215 aaKnown RBP18.42■□□□□ 0.54
SHANK3-202ENST00000414786 METTL27Q8N6F8 245 aaPredicted RBP18.42■□□□□ 0.54
SHANK3-202ENST00000414786 HAVCR1Q96D42 359 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 RBM18Q96H35 190 aaKnown RBP18.42■□□□□ 0.54
SHANK3-202ENST00000414786 APOPT1Q96IL0 206 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 Q96MT0 163 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 TMEM27Q9HBJ8 222 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 TRIM38O00635 465 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 GNSP15586 552 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 RPL17P18621 184 aaKnown RBP18.42■□□□□ 0.54
SHANK3-202ENST00000414786 CENPMQ9NSP4 180 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 TNPO3Q9Y5L0 923 aaKnown RBP18.42■□□□□ 0.54
SHANK3-202ENST00000414786 SPATA31E1Q6ZUB1 1445 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 MT-ND1P03886 318 aa18.42■□□□□ 0.54
SHANK3-202ENST00000414786 ZNF823P16415 610 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms