RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 XPO4Q9C0E2 1151 aaKnown RBP9.51□□□□□ -0.89
RFFL-203ENST00000413582 VPS16Q9H269 839 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 IMPACTQ9P2X3 320 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 FZD10Q9ULW2 581 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 VPS4AQ9UN37 437 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 POLHQ9Y253 713 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 A1L4Q6 167 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 CCP110O43303 1012 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 MAP3K6O95382 1288 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 EML2O95834 649 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 SOD1P00441 154 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 KRT3P12035 628 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 UCHL3P15374 230 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 ZNF28P17035 718 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 CHRNB2P17787 502 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 GPD1P21695 349 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 VIPR1P32241 457 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 PAPOLAP51003 745 aaKnown RBP9.5□□□□□ -0.89
RFFL-203ENST00000413582 NDST2P52849 883 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 TPI1P60174 286 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 AP1S1P61966 158 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 POLR2LP62875 67 aaKnown RBP9.5□□□□□ -0.89
RFFL-203ENST00000413582 CDR2Q01850 454 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 FKBP15Q5T1M5 1219 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 RAET1GQ6H3X3 334 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 WDR59Q6PJI9 974 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 HSD11B1LQ7Z5J1 315 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 TMEM135Q86UB9 458 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 ZNF677Q86XU0 584 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 CBARPQ8N350 705 aaPredicted RBP9.5□□□□□ -0.89
RFFL-203ENST00000413582 PAF1Q8N7H5 531 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 CPT1CQ8TCG5 803 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 ERGIC2Q96RQ1 377 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 SLC39A8Q9C0K1 460 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 CUEDC1Q9NWM3 386 aaPredicted RBP9.5□□□□□ -0.89
RFFL-203ENST00000413582 KCTD5Q9NXV2 234 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 CROTQ9UKG9 612 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 TLK1Q9UKI8 766 aa9.5□□□□□ -0.89
RFFL-203ENST00000413582 MN1Q10571 1320 aaPredicted RBP9.5□□□□□ -0.89
RFFL-203ENST00000413582 GOLGA6CA6NDK9 693 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 GOLGA6BA6NDN3 693 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 NPIPB15A6NHN6 443 aaPredicted RBP9.49□□□□□ -0.89
RFFL-203ENST00000413582 ARHGAP42A6NI28 874 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 TTLL8A6PVC2 850 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 GOLGA6L6A8MZA4 724 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 PES1O00541 588 aaKnown RBP9.49□□□□□ -0.89
RFFL-203ENST00000413582 POLR1CO15160 346 aaPredicted RBP9.49□□□□□ -0.89
RFFL-203ENST00000413582 HTRA2O43464 458 aaPredicted RBP9.49□□□□□ -0.89
RFFL-203ENST00000413582 SOCS5O75159 536 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 CPP00450 1065 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 ANKRD34CP0C6C1 535 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 GOLGA6DP0CG33 693 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 TNFAIP3P21580 790 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 HTR7P34969 479 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 DLSTP36957 453 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 PBX1P40424 430 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 PPM1FP49593 454 aaPredicted RBP9.49□□□□□ -0.89
RFFL-203ENST00000413582 SCNN1BP51168 640 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 AIF1P55008 147 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 HHEXQ03014 270 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 DPTQ07507 201 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 NSUN2Q08J23 767 aaKnown RBP eCLIP9.49□□□□□ -0.89
RFFL-203ENST00000413582 LRP8Q14114 963 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 TRIM14Q14142 442 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 ERV3-1Q14264 604 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 RFTN1Q14699 578 aaPredicted RBP9.49□□□□□ -0.89
RFFL-203ENST00000413582 PYCR3Q53H96 274 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 DENND2CQ68D51 928 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 ZNF787Q6DD87 383 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 SCYL2Q6P3W7 929 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 ARHGAP36Q6ZRI8 547 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 Q6ZVL8 140 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 TRIM74Q86UV6 250 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 ARHGAP12Q8IWW6 846 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 NPWQ8N729 165 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 C3orf20Q8ND61 904 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 FNIP1Q8TF40 1166 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 NCSTNQ92542 709 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 RNF31Q96EP0 1072 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 PSKH2Q96QS6 385 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 SELENOOQ9BVL4 669 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 STK33Q9BYT3 514 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 ULBP3Q9BZM4 244 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 SP110Q9HB58 689 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 SARS2Q9NP81 518 aaKnown RBP9.49□□□□□ -0.89
RFFL-203ENST00000413582 GOLGA6AQ9NYA3 693 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 TMEM98Q9Y2Y6 226 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 PCDHB3Q9Y5E6 796 aa9.49□□□□□ -0.89
RFFL-203ENST00000413582 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.49□□□□□ -0.89
RFFL-203ENST00000413582 OAS3Q9Y6K5 1087 aaKnown RBP9.49□□□□□ -0.89
RFFL-203ENST00000413582 TRBV23OR9-2A0A075B6M9 112 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 TCRBV5S1A1TA0A578 114 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 TTC24A2A3L6 582 aaPredicted RBP9.48□□□□□ -0.89
RFFL-203ENST00000413582 PSMD11O00231 422 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 DNAJB5O75953 348 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 GFPT2O94808 682 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 SORBS2O94875 1100 aaKnown RBP9.48□□□□□ -0.89
RFFL-203ENST00000413582 UNGP13051 313 aaPredicted RBP9.48□□□□□ -0.89
RFFL-203ENST00000413582 DCTP40126 519 aa9.48□□□□□ -0.89
RFFL-203ENST00000413582 NOP2P46087 812 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms