RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 HLA-DPA1P20036 260 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 ALDH3B2P48448 385 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 DIO3P55073 304 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 CDH15P55291 814 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 ATP6V0D1P61421 351 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 CLCQ05315 142 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 ZNF235Q14590 738 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 LRRC23Q53EV4 343 aaPredicted RBP14.92□□□□□ -0.02
TTC39A-208ENST00000413473 IRAK1BP1Q5VVH5 260 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 PAQR3Q6TCH7 311 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 AQP12AQ8IXF9 295 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 DCP1BQ8IZD4 617 aaKnown RBP14.92□□□□□ -0.02
TTC39A-208ENST00000413473 LRRC58Q96CX6 371 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 MYEOVQ96EZ4 313 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 FEM1CQ96JP0 617 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 SEMA4BQ9NPR2 832 aaPredicted RBP14.92□□□□□ -0.02
TTC39A-208ENST00000413473 TIMM22Q9Y584 194 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 TANC1Q9C0D5 1861 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 DRGXA6NNA5 263 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 FAM155AB1AL88 458 aaPredicted RBP14.92□□□□□ -0.02
TTC39A-208ENST00000413473 HNRNPRO43390 633 aaKnown RBP14.92□□□□□ -0.02
TTC39A-208ENST00000413473 HSD17B1P14061 328 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 HOXB8P17481 243 aaPredicted RBP14.92□□□□□ -0.02
TTC39A-208ENST00000413473 EEF1DP29692 281 aaKnown RBP14.92□□□□□ -0.02
TTC39A-208ENST00000413473 STC1P52823 247 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 PRMT9Q6P2P2 845 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 TTC9BQ8N6N2 239 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 ATAD1Q8NBU5 361 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 KLHDC9Q8NEP7 349 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 CDKN2AIPNLQ96HQ2 116 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 C8orf48Q96LL4 319 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 GID8Q9NWU2 228 aa14.92□□□□□ -0.02
TTC39A-208ENST00000413473 RSL24D1Q9UHA3 163 aaKnown RBP14.92□□□□□ -0.02
TTC39A-208ENST00000413473 SUPT3HB4E1H0 165 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 DLGAP1O14490 977 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 SUPT3HO75486 399 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 SOAT2O75908 522 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 RHOBTB1O94844 696 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 OAZ2O95190 189 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 GNAO1P09471 354 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 IL10P22301 178 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 APLP1P51693 650 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 INPP5AQ14642 412 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 PARP15Q460N3 678 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 C10orf120Q5SQS8 335 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 BLOC1S3Q6QNY0 202 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 CAMK1DQ8IU85 385 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 ALDH16A1Q8IZ83 802 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 FIBCD1Q8N539 461 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 STAG3L4Q8TBR4 150 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 PEX13Q92968 403 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 CLK4Q9HAZ1 481 aaKnown RBP14.91□□□□□ -0.02
TTC39A-208ENST00000413473 POPDC3Q9HBV1 291 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 MARCH2Q9P0N8 246 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 IKZF3Q9UKT9 509 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 RNF112Q9ULX5 631 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 TMCO1Q9UM00 188 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 SLC12A8A0AV02 714 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 MATN4O95460 622 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 FMO4P31512 558 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 LCP2Q13094 533 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 TRIP4Q15650 581 aaPredicted RBP14.91□□□□□ -0.02
TTC39A-208ENST00000413473 NFE2Q16621 373 aaPredicted RBP14.91□□□□□ -0.02
TTC39A-208ENST00000413473 ZNF598Q86UK7 904 aaKnown RBP14.91□□□□□ -0.02
TTC39A-208ENST00000413473 IFNEQ86WN2 208 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 FBXO39Q8N4B4 442 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 KIAA1191Q96A73 305 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 VPS33AQ96AX1 596 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 TRIM15Q9C019 465 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 LIN28AQ9H9Z2 209 aaKnown RBP14.91□□□□□ -0.02
TTC39A-208ENST00000413473 SLC52A3Q9NQ40 469 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 AGPAT4Q9NRZ5 378 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 SMOXQ9NWM0 555 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 ACTR3BQ9P1U1 418 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 PRG3Q9Y2Y8 225 aaPredicted RBP14.91□□□□□ -0.02
TTC39A-208ENST00000413473 ACTL7AQ9Y615 435 aa14.91□□□□□ -0.02
TTC39A-208ENST00000413473 ZFC3H1O60293 1989 aaKnown RBP14.91□□□□□ -0.02
TTC39A-208ENST00000413473 RNF103-CHMP3A0A140T963 221 aa14.9□□□□□ -0.02
TTC39A-208ENST00000413473 PRAMEF11O60813 436 aa14.9□□□□□ -0.02
TTC39A-208ENST00000413473 KERAO60938 352 aa14.9□□□□□ -0.02
TTC39A-208ENST00000413473 CRCPO75575 148 aa14.9□□□□□ -0.02
TTC39A-208ENST00000413473 EPOP01588 193 aa14.9□□□□□ -0.02
TTC39A-208ENST00000413473 CDK4P11802 303 aa14.9□□□□□ -0.02
TTC39A-208ENST00000413473 FASP25445 335 aa14.9□□□□□ -0.02
TTC39A-208ENST00000413473 PSMA4P25789 261 aaKnown RBP14.9□□□□□ -0.02
TTC39A-208ENST00000413473 OXTRP30559 389 aa14.9□□□□□ -0.02
TTC39A-208ENST00000413473 TSNQ15631 228 aaKnown RBP14.9□□□□□ -0.02
TTC39A-208ENST00000413473 SETMARQ53H47 684 aaPredicted RBP14.9□□□□□ -0.02
TTC39A-208ENST00000413473 LCN8Q6JVE9 175 aa14.9□□□□□ -0.02
TTC39A-208ENST00000413473 EPHX4Q8IUS5 362 aa14.9□□□□□ -0.02
TTC39A-208ENST00000413473 DNAJB14Q8TBM8 379 aa14.9□□□□□ -0.02
TTC39A-208ENST00000413473 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.9□□□□□ -0.02
TTC39A-208ENST00000413473 FUBP3Q96I24 572 aaKnown RBP eCLIP14.9□□□□□ -0.02
TTC39A-208ENST00000413473 RPL10LQ96L21 214 aaKnown RBP14.9□□□□□ -0.02
TTC39A-208ENST00000413473 SYTL2Q9HCH5 934 aa14.9□□□□□ -0.02
TTC39A-208ENST00000413473 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.9□□□□□ -0.02
TTC39A-208ENST00000413473 SLC8A2Q9UPR5 921 aa14.9□□□□□ -0.02
TTC39A-208ENST00000413473 MED16Q9Y2X0 877 aa14.9□□□□□ -0.02
TTC39A-208ENST00000413473 ARPC2O15144 300 aa14.9□□□□□ -0.02
TTC39A-208ENST00000413473 SERPINF2P08697 491 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms