RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ELP6Q0PNE2 266 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 NFATC2Q13469 925 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 CCINQ13939 588 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 PDE1CQ14123 709 aaPredicted RBP6.62□□□□□ -1.35
VPS41-204ENST00000413141 STARD3Q14849 445 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 CST6Q15828 149 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 RBM20Q5T481 1227 aaKnown RBP6.62□□□□□ -1.35
VPS41-204ENST00000413141 PIP5KL1Q5T9C9 394 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 FAM46CQ5VWP2 391 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 ZDHHC20Q5W0Z9 365 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 ZNF776Q68DI1 518 aaPredicted RBP6.62□□□□□ -1.35
VPS41-204ENST00000413141 FAM45BPQ6NSW5 357 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 KIAA1211LQ6NV74 962 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 FBXL19Q6PCT2 694 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 RFLNAQ6ZTI6 216 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 CDHR3Q6ZTQ4 885 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 ERN2Q76MJ5 926 aaKnown RBP6.62□□□□□ -1.35
VPS41-204ENST00000413141 HSD11B1LQ7Z5J1 315 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 SNX20Q7Z614 316 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 SDCCAG8Q86SQ7 713 aaPredicted RBP6.62□□□□□ -1.35
VPS41-204ENST00000413141 CLEC14AQ86T13 490 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 TTC7BQ86TV6 843 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 CACUL1Q86Y37 369 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 SLC41A1Q8IVJ1 513 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 ADHFE1Q8IWW8 467 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 AADATQ8N5Z0 425 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 OR2T3Q8NH03 318 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 MAFAQ8NHW3 353 aaPredicted RBP6.62□□□□□ -1.35
VPS41-204ENST00000413141 FAM45AQ8TCE6 357 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 MGARPQ8TDB4 240 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 TCP10LQ8TDR4 215 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 DENND1AQ8TEH3 1009 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 ATXN2LQ8WWM7 1075 aaKnown RBP6.62□□□□□ -1.35
VPS41-204ENST00000413141 FAM3CQ92520 227 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.62□□□□□ -1.351e-6■■■■□ 20.6
VPS41-204ENST00000413141 ELMO2Q96JJ3 720 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 CABS1Q96KC9 395 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 TCF12Q99081 682 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 NDNQ99608 321 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 OLFM1Q99784 485 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 OMDQ99983 421 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 CAPS2Q9BXY5 557 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 IQCGQ9H095 443 aaKnown RBP6.62□□□□□ -1.35
VPS41-204ENST00000413141 FAM96AQ9H5X1 160 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 FBRSQ9HAH7 460 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 CD248Q9HCU0 757 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 PRDM6Q9NQX0 595 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 INTS9Q9NV88 658 aaKnown RBP6.62□□□□□ -1.35
VPS41-204ENST00000413141 NKIRAS1Q9NYS0 192 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 PKD2L2Q9NZM6 624 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.62□□□□□ -1.35
VPS41-204ENST00000413141 SLC39A10Q9ULF5 831 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 VPS9D1Q9Y2B5 631 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 SLC30A1Q9Y6M5 507 aa6.62□□□□□ -1.35
VPS41-204ENST00000413141 PLXNB3Q9ULL4 1909 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 A0A096LPK6 155 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 A0A1W2PQF6 199 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 UBA6A0AVT1 1052 aaPredicted RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 RGSL1A5PLK6 1076 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 AGAP14A8MT82 685 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 PFDN6O15212 129 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 MID1O15344 667 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 PHGDHO43175 533 aaKnown RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 RRP9O43818 475 aaKnown RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 RNASEH1O60930 286 aaKnown RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 GLRA3O75311 464 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 NDUFS3O75489 264 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 WISP3O95389 354 aaPredicted RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 ASMTLO95671 621 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 TOP3BO95985 862 aaKnown RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 MPOP05164 745 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 C2P06681 752 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 SLC35E2BP0CK96 405 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 STMN1P16949 149 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 GM2AP17900 193 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 SAT1P21673 171 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 C5AR1P21730 350 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 FDXRP22570 491 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 ACRV1P26436 265 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 CRABP2P29373 138 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 CRHR1P34998 444 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 CA5AP35218 305 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 ETV3P41162 512 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 PTGER3P43115 390 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 ETV4P43268 484 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 PGGT1BP53609 377 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 ADARP55265 1226 aaKnown RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 CDKN2DP55273 166 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 WDR4P57081 412 aaKnown RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 TAS2R39P59534 338 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 RAB10P61026 200 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 RPS14P62263 151 aaKnown RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 GNGT1P63211 74 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 IRF9Q00978 393 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 CNTN1Q12860 1018 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 ITGA9Q13797 1035 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 ZNF460Q14592 562 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 USP10Q14694 798 aaKnown RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 LRRC14Q15048 493 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 MLF2Q15773 248 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms