RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 HEPHQ9BQS7 1158 aa8.59□□□□□ -1.03
HMGN1P34-201ENST00000413023 EBF4Q9BQW3 602 aa8.59□□□□□ -1.03
HMGN1P34-201ENST00000413023 BOCQ9BWV1 1114 aa8.59□□□□□ -1.03
HMGN1P34-201ENST00000413023 TRIM55Q9BYV6 548 aa8.59□□□□□ -1.03
HMGN1P34-201ENST00000413023 ZDHHC6Q9H6R6 413 aa8.59□□□□□ -1.03
HMGN1P34-201ENST00000413023 ECT2Q9H8V3 914 aa8.59□□□□□ -1.03
HMGN1P34-201ENST00000413023 GPAMQ9HCL2 828 aa8.59□□□□□ -1.03
HMGN1P34-201ENST00000413023 ZDHHC4Q9NPG8 344 aa8.59□□□□□ -1.03
HMGN1P34-201ENST00000413023 INTS10Q9NVR2 710 aaKnown RBP8.59□□□□□ -1.03
HMGN1P34-201ENST00000413023 ELOVL2Q9NXB9 296 aa8.59□□□□□ -1.03
HMGN1P34-201ENST00000413023 MARCOQ9UEW3 520 aaPredicted RBP8.59□□□□□ -1.03
HMGN1P34-201ENST00000413023 SARDHQ9UL12 918 aa8.59□□□□□ -1.03
HMGN1P34-201ENST00000413023 CDH7Q9ULB5 785 aa8.59□□□□□ -1.03
HMGN1P34-201ENST00000413023 TRIM33Q9UPN9 1127 aa8.59□□□□□ -1.03
HMGN1P34-201ENST00000413023 USH1CQ9Y6N9 552 aa8.59□□□□□ -1.03
HMGN1P34-201ENST00000413023 A0A0G2JND7 137 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 UBA6A0AVT1 1052 aaPredicted RBP8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 TSPAN11A1L157 253 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 LRRC14BA6NHZ5 514 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 AGAP14A8MT82 685 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 CDC7O00311 574 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 PLK4O00444 970 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 SPINT1O43278 529 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 LEFTY1O75610 366 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 SRP72O76094 671 aaKnown RBP8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 RHOBTB1O94844 696 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 TSPAN12O95859 305 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 CD1EP15812 388 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 GM2AP17900 193 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 TFEBP19484 476 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 GRK2P25098 689 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 SERPINB3P29508 390 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 PMLP29590 882 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 SERPINA4P29622 427 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 BMP8BP34820 402 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 SCTRP47872 440 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 IDH3AP50213 366 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 ARFIP2P53365 341 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 NAGLUP54802 743 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 SLC12A2P55011 1212 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 NCALDP61601 193 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 CACNG1Q06432 222 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 RALGDSQ12967 914 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 ACAP2Q15057 778 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 CTC1Q2NKJ3 1217 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 UNC50Q53HI1 259 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 ARL13AQ5H913 290 aaPredicted RBP8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 C9orf64Q5T6V5 341 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 VWA5B1Q5TIE3 1220 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 LRRC66Q68CR7 880 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 FAM151BQ6UXP7 276 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 HSD11B1LQ7Z5J1 315 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 TTC7BQ86TV6 843 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 METTL3Q86U44 580 aaKnown RBP8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 ALYREFQ86V81 257 aaKnown RBP8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 SERPINA9Q86WD7 417 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 WDR75Q8IWA0 830 aaKnown RBP8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 STK40Q8N2I9 435 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 ZNF781Q8N8C0 355 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 SIDT2Q8NBJ9 832 aaKnown RBP8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 ZNF398Q8TD17 642 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 FGF14Q92915 247 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 TSPAN17Q96FV3 270 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 FAM129BQ96TA1 746 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 ACOX2Q99424 681 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 KXD1Q9BQD3 176 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 SHCBP1LQ9BZQ2 653 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 CIPCQ9C0C6 399 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 DRC3Q9H069 523 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 NSUN3Q9H649 340 aaKnown RBP8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 CYP4F12Q9HCS2 524 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 DZANK1Q9NVP4 752 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 OBP2AQ9NY56 170 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 GTSE1Q9NYZ3 720 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 GDE1Q9NZC3 331 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 B4GALT6Q9UBX8 382 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 ZDHHC2Q9UIJ5 367 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 SLC12A4Q9UP95 1085 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 FAM50BQ9Y247 325 aa8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 OAS3Q9Y6K5 1087 aaKnown RBP8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 HELZP42694 1942 aaKnown RBP8.58□□□□□ -1.04
HMGN1P34-201ENST00000413023 ATXN2Q99700 1313 aaKnown RBP8.57□□□□□ -1.04
HMGN1P34-201ENST00000413023 MKI67P46013 3256 aaKnown RBP8.57□□□□□ -1.04
HMGN1P34-201ENST00000413023 A8MT66 165 aa8.57□□□□□ -1.04
HMGN1P34-201ENST00000413023 TMEM114B3SHH9 223 aa8.57□□□□□ -1.04
HMGN1P34-201ENST00000413023 PPP6CO00743 305 aa8.57□□□□□ -1.04
HMGN1P34-201ENST00000413023 UBFD1O14562 309 aaKnown RBP8.57□□□□□ -1.04
HMGN1P34-201ENST00000413023 TBX10O75333 385 aa8.57□□□□□ -1.04
HMGN1P34-201ENST00000413023 ADH1CP00326 375 aa8.57□□□□□ -1.04
HMGN1P34-201ENST00000413023 APOA4P06727 396 aa8.57□□□□□ -1.04
HMGN1P34-201ENST00000413023 SRPRAP08240 638 aaKnown RBP8.57□□□□□ -1.04
HMGN1P34-201ENST00000413023 TROVE2P10155 538 aaKnown RBP eCLIP8.57□□□□□ -1.04
HMGN1P34-201ENST00000413023 LAMP2P13473 410 aa8.57□□□□□ -1.04
HMGN1P34-201ENST00000413023 ALOX15P16050 662 aaPredicted RBP8.57□□□□□ -1.04
HMGN1P34-201ENST00000413023 ZNF37AP17032 561 aaPredicted RBP8.57□□□□□ -1.04
HMGN1P34-201ENST00000413023 MPSTP25325 297 aa8.57□□□□□ -1.04
HMGN1P34-201ENST00000413023 SLC26A3P40879 764 aa8.57□□□□□ -1.04
HMGN1P34-201ENST00000413023 LIG3P49916 1009 aa8.57□□□□□ -1.04
HMGN1P34-201ENST00000413023 CLCN7P51798 805 aa8.57□□□□□ -1.04
HMGN1P34-201ENST00000413023 HK3P52790 923 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms