RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 CCDC38Q502W7 563 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 FNDC3BQ53EP0 1204 aaKnown RBP5.39□□□□□ -1.55
LINC00342-201ENST00000412393 HSP90AA4PQ58FG1 418 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 FAM133BQ5BKY9 247 aaKnown RBP5.39□□□□□ -1.55
LINC00342-201ENST00000412393 FKBP15Q5T1M5 1219 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 MPP7Q5T2T1 576 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 PIK3R6Q5UE93 754 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 DAB2IPQ5VWQ8 1189 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 SYPL2Q5VXT5 272 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 LYSMD4Q5XG99 296 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 TMEM215Q68D42 235 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 NADSYN1Q6IA69 706 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 RFWD3Q6PCD5 774 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 TRMT10BQ6PF06 316 aaKnown RBP5.39□□□□□ -1.55
LINC00342-201ENST00000412393 POMZP3Q6PJE2 187 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 SERPINA13PQ6UXR4 307 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 CHST9Q7L1S5 443 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 BEND5Q7L4P6 421 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 TMEM110Q86TL2 294 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 TAC4Q86UU9 113 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 SYT12Q8IV01 421 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 AHI1Q8N157 1196 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 DEFB119Q8N690 84 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 TEX9Q8N6V9 391 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 ZNF557Q8N988 423 aaPredicted RBP5.39□□□□□ -1.55
LINC00342-201ENST00000412393 HJURPQ8NCD3 748 aaPredicted RBP5.39□□□□□ -1.55
LINC00342-201ENST00000412393 ZNF483Q8TF39 744 aaPredicted RBP5.39□□□□□ -1.55
LINC00342-201ENST00000412393 ZFAND2BQ8WV99 257 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 SORCS1Q8WY21 1168 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 N4BP2L2Q92802 583 aaPredicted RBP5.39□□□□□ -1.55
LINC00342-201ENST00000412393 ZBTB9Q96C00 473 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 SLC39A13Q96H72 371 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 RSRC1Q96IZ7 334 aaKnown RBP5.39□□□□□ -1.55
LINC00342-201ENST00000412393 LMF1Q96S06 567 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 NUSAP1Q9BXS6 441 aaKnown RBP5.39□□□□□ -1.55
LINC00342-201ENST00000412393 NDST4Q9H3R1 872 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 PRDM16Q9HAZ2 1276 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 EPB41L5Q9HCM4 733 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 SIX2Q9NPC8 291 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 CD93Q9NPY3 652 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 TMEM9BQ9NQ34 198 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 ABCB8Q9NUT2 735 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 EVLQ9UI08 416 aaPredicted RBP5.39□□□□□ -1.55
LINC00342-201ENST00000412393 CYTH4Q9UIA0 394 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 AJAP1Q9UKB5 411 aaPredicted RBP5.39□□□□□ -1.55
LINC00342-201ENST00000412393 CROTQ9UKG9 612 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 LRRC42Q9Y546 428 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 BZW2Q9Y6E2 419 aaKnown RBP5.39□□□□□ -1.55
LINC00342-201ENST00000412393 PCSK5Q92824 1860 aa5.39□□□□□ -1.55
LINC00342-201ENST00000412393 CABIN1Q9Y6J0 2220 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 HGSO14964 777 aaPredicted RBP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 FOXS1O43638 330 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 HEXIM1O94992 359 aaKnown RBP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 ATP6V1G2O95670 118 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 TRUB2O95900 331 aaKnown RBP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 APOEP02649 317 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 SERPING1P05155 500 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 CFIP05156 583 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 ATP5BP06576 529 aaKnown RBP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 FESP07332 822 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 FAM153BP0C7A2 387 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 ACADMP11310 421 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 HLA-EP13747 358 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 POLR2EP19388 210 aaKnown RBP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 CD6P30203 668 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 CD70P32970 193 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 HSD17B3P37058 310 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 MMP13P45452 471 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 SEC24CP53992 1094 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 RWDD2BP57060 319 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 SNX16P57768 344 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 BPIFB4P59827 614 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 RPS24P62847 133 aaKnown RBP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 YWHAZP63104 245 aaKnown RBP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 PITX1P78337 314 aaPredicted RBP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 ZNF844Q08AG5 666 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 C2orf54Q08AI8 447 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 LMAN2Q12907 356 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 HNRNPA0Q13151 305 aaKnown RBP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 BLMHQ13867 455 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 RAPGEF1Q13905 1077 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 DRAP1Q14919 205 aaPredicted RBP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 PDCD2Q16342 344 aaPredicted RBP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 DUOXA1Q1HG43 343 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 FAM153CQ494X1 144 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 DCAF6Q58WW2 860 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 TRIM61Q5EBN2 209 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 MS4A13Q5J8X5 152 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 EFHC1Q5JVL4 640 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 CCDC181Q5TID7 509 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 MBLAC2Q68D91 279 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 OR6B2Q6IFH4 312 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 TEPPQ6URK8 271 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 MAATS1Q7Z4T9 603 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 KIAA0907Q7Z7F0 614 aaPredicted RBP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 ADIPOR2Q86V24 386 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 SLC47A2Q86VL8 602 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 CACUL1Q86Y37 369 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 TMPRSS6Q8IU80 811 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 PASD1Q8IV76 773 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms