RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 P2RX3P56373 397 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 NANOS3P60323 173 aaKnown RBP5.21□□□□□ -1.58
LSM5-206ENST00000409987 SORDQ00796 357 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 C2orf68Q2NKX9 166 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 ZNF284Q2VY69 593 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 USP41Q3LFD5 358 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 PARP10Q53GL7 1025 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 WASHC2DQ5SRD0 308 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 C6orf141Q5SZD1 244 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 JADE1Q6IE81 842 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 IYDQ6PHW0 289 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 SHQ1Q6PI26 577 aaKnown RBP5.21□□□□□ -1.58
LSM5-206ENST00000409987 SYCE2Q6PIF2 218 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 PET117Q6UWS5 81 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 LINGO2Q7L985 606 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 PLPPR4Q7Z2D5 763 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 TICAM1Q8IUC6 712 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 CCDC13Q8IYE1 715 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 NANOGP1Q8N7R0 232 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 BEST2Q8NFU1 509 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 OR6J1Q8NGC5 347 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 ERGIC1Q969X5 290 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 FAM162AQ96A26 154 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 SIPA1Q96FS4 1042 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 PGAM5Q96HS1 289 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 SLC41A2Q96JW4 573 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 APOLD1Q96LR9 279 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 GFM1Q96RP9 751 aaKnown RBP5.21□□□□□ -1.58
LSM5-206ENST00000409987 CRAMP1Q96RY5 1269 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 FAM110AQ9BQ89 295 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 ANKRD2Q9GZV1 360 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 ABCG4Q9H172 646 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 COPS7BQ9H9Q2 264 aaPredicted RBP5.21□□□□□ -1.58
LSM5-206ENST00000409987 LTB4R2Q9NPC1 389 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 ZBTB40Q9NUA8 1239 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 CISD1Q9NZ45 108 aaKnown RBP5.21□□□□□ -1.58
LSM5-206ENST00000409987 HS3ST3B1Q9Y662 390 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 SESN1Q9Y6P5 492 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 ZNF804BA4D1E1 1349 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 hCG_1809904A0A1W2PP81 198 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 A0A1W2PPE2 198 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 A0A1W2PR64 198 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 CTDSP2O14595 271 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 NDUFS3O75489 264 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 B3GALNT1O75752 331 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 GNLYP22749 145 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 MMP13P45452 471 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 NAE1Q13564 534 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 KLF9Q13886 244 aaPredicted RBP5.2□□□□□ -1.58
LSM5-206ENST00000409987 CDONQ4KMG0 1287 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 ZNF628Q5EBL2 1059 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 ANKRD54Q6NXT1 300 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 TRAPPC11Q7Z392 1133 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 PIWIL3Q7Z3Z3 882 aaKnown RBP5.2□□□□□ -1.58
LSM5-206ENST00000409987 CTU1Q7Z7A3 348 aaKnown RBP5.2□□□□□ -1.58
LSM5-206ENST00000409987 GLRX5Q86SX6 157 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 PATL1Q86TB9 770 aaKnown RBP5.2□□□□□ -1.58
LSM5-206ENST00000409987 LCA5Q86VQ0 697 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 WDR63Q8IWG1 891 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 MMP21Q8N119 569 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 ZBTB8BQ8NAP8 495 aaPredicted RBP5.2□□□□□ -1.58
LSM5-206ENST00000409987 ARRDC2Q8TBH0 407 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 SECISBP2LQ93073 1101 aaKnown RBP5.2□□□□□ -1.58
LSM5-206ENST00000409987 OTULINQ96BN8 352 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 ELMOD3Q96FG2 381 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 TMEM68Q96MH6 324 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 TMEM47Q9BQJ4 181 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 SRSF8Q9BRL6 282 aaKnown RBP5.2□□□□□ -1.58
LSM5-206ENST00000409987 THUMPD3Q9BV44 507 aaKnown RBP5.2□□□□□ -1.58
LSM5-206ENST00000409987 SPRTNQ9H040 489 aaPredicted RBP5.2□□□□□ -1.58
LSM5-206ENST00000409987 ISCUQ9H1K1 167 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 SLITRK6Q9H5Y7 841 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 SETD4Q9NVD3 440 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 ADPRHL2Q9NX46 363 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 FBXL17Q9UF56 701 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 TRPV2Q9Y5S1 764 aa5.2□□□□□ -1.58
LSM5-206ENST00000409987 TMEM202A6NGA9 273 aa5.19□□□□□ -1.58
LSM5-206ENST00000409987 CDRT15L2A8MXV6 281 aa5.19□□□□□ -1.58
LSM5-206ENST00000409987 IPO8O15397 1037 aaKnown RBP5.19□□□□□ -1.58
LSM5-206ENST00000409987 SYNCRIPO60506 623 aaKnown RBP5.19□□□□□ -1.58
LSM5-206ENST00000409987 SLC22A3O75751 556 aa5.19□□□□□ -1.58
LSM5-206ENST00000409987 P4HA1P13674 534 aa5.19□□□□□ -1.58
LSM5-206ENST00000409987 DESP17661 470 aa5.19□□□□□ -1.58
LSM5-206ENST00000409987 CPT2P23786 658 aa5.19□□□□□ -1.58
LSM5-206ENST00000409987 CHATP28329 748 aa5.19□□□□□ -1.58
LSM5-206ENST00000409987 HPDP32754 393 aaPredicted RBP5.19□□□□□ -1.58
LSM5-206ENST00000409987 TCF7P36402 384 aaPredicted RBP5.19□□□□□ -1.58
LSM5-206ENST00000409987 SLC15A1P46059 708 aa5.19□□□□□ -1.58
LSM5-206ENST00000409987 ME1P48163 572 aa5.19□□□□□ -1.58
LSM5-206ENST00000409987 RFX5P48382 616 aaPredicted RBP5.19□□□□□ -1.58
LSM5-206ENST00000409987 COMPP49747 757 aaPredicted RBP5.19□□□□□ -1.58
LSM5-206ENST00000409987 LIG4P49917 911 aa5.19□□□□□ -1.58
LSM5-206ENST00000409987 GALCP54803 685 aa5.19□□□□□ -1.58
LSM5-206ENST00000409987 TRAF1Q13077 416 aa5.19□□□□□ -1.58
LSM5-206ENST00000409987 CAMK2DQ13557 499 aa5.19□□□□□ -1.58
LSM5-206ENST00000409987 PTGR1Q14914 329 aa5.19□□□□□ -1.58
LSM5-206ENST00000409987 KRT24Q2M2I5 525 aa5.19□□□□□ -1.58
LSM5-206ENST00000409987 SOWAHCQ53LP3 525 aaPredicted RBP5.19□□□□□ -1.58
LSM5-206ENST00000409987 DCAF6Q58WW2 860 aa5.19□□□□□ -1.58
LSM5-206ENST00000409987 ZNF805Q5CZA5 627 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms