RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 RTL3Q8N8U3 475 aaKnown RBP16.78■□□□□ 0.28
SYNC-202ENST00000409190 FAM45AQ8TCE6 357 aa16.78■□□□□ 0.28
SYNC-202ENST00000409190 SPON2Q9BUD6 331 aa16.78■□□□□ 0.28
SYNC-202ENST00000409190 ING2Q9H160 280 aa16.78■□□□□ 0.28
SYNC-202ENST00000409190 BPIFA1Q9NP55 256 aa16.78■□□□□ 0.28
SYNC-202ENST00000409190 MBLAC1A4D2B0 266 aaPredicted RBP16.77■□□□□ 0.28
SYNC-202ENST00000409190 NPEPPSL1A6NEC2 478 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 CD3EAPO15446 510 aaKnown RBP16.77■□□□□ 0.28
SYNC-202ENST00000409190 KATNA1O75449 491 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 CD1DP15813 335 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 LBPP18428 481 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 NFKBIAP25963 317 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 VARSP26640 1264 aaKnown RBP16.77■□□□□ 0.28
SYNC-202ENST00000409190 PIK3CGP48736 1102 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 XKR4Q5GH76 650 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 C16orf87Q6PH81 154 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 OR10Q1Q8NGQ4 319 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 RMDN1Q96DB5 314 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 RPRD1AQ96P16 312 aaPredicted RBP16.77■□□□□ 0.28
SYNC-202ENST00000409190 SLC25A51Q9H1U9 297 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 GALPQ9UBC7 116 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 CNOT11Q9UKZ1 510 aaKnown RBP16.77■□□□□ 0.28
SYNC-202ENST00000409190 PTCH2Q9Y6C5 1203 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 BTN3A1O00481 513 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 ODC1P11926 461 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 GNA12Q03113 381 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 SLC2A7Q6PXP3 512 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 ADGRG5Q8IZF4 528 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 FBXO39Q8N4B4 442 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 BRI3BPQ8WY22 251 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 OSBPL6Q9BZF3 934 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 SLC38A7Q9NVC3 462 aa16.77■□□□□ 0.28
SYNC-202ENST00000409190 WARS2Q9UGM6 360 aaKnown RBP16.77■□□□□ 0.28
SYNC-202ENST00000409190 PRG3Q9Y2Y8 225 aaPredicted RBP16.77■□□□□ 0.28
SYNC-202ENST00000409190 RBM47A0AV96 593 aaKnown RBP16.77■□□□□ 0.27
SYNC-202ENST00000409190 RENBPP51606 427 aa16.77■□□□□ 0.27
SYNC-202ENST00000409190 LAPTM5Q13571 262 aa16.77■□□□□ 0.27
SYNC-202ENST00000409190 IMPG1Q17R60 797 aa16.77■□□□□ 0.27
SYNC-202ENST00000409190 USP41Q3LFD5 358 aa16.77■□□□□ 0.27
SYNC-202ENST00000409190 ANKRD34AQ69YU3 496 aa16.77■□□□□ 0.27
SYNC-202ENST00000409190 TIGD7Q6NT04 549 aaPredicted RBP16.77■□□□□ 0.27
SYNC-202ENST00000409190 PLEKHH3Q7Z736 793 aa16.77■□□□□ 0.27
SYNC-202ENST00000409190 GPR180Q86V85 440 aa16.77■□□□□ 0.27
SYNC-202ENST00000409190 CLEC4FQ8N1N0 589 aa16.77■□□□□ 0.27
SYNC-202ENST00000409190 TMEM86AQ8N2M4 240 aa16.77■□□□□ 0.27
SYNC-202ENST00000409190 ANKFN1Q8N957 763 aa16.77■□□□□ 0.27
SYNC-202ENST00000409190 ZFYVE28Q9HCC9 887 aa16.77■□□□□ 0.27
SYNC-202ENST00000409190 ZFC3H1O60293 1989 aaKnown RBP16.76■□□□□ 0.27
SYNC-202ENST00000409190 MYADML2A6NDP7 307 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 BMP2P12643 396 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 MAP4P27816 1152 aaKnown RBP16.76■□□□□ 0.27
SYNC-202ENST00000409190 CD52P31358 61 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 NRG1Q02297 640 aaPredicted RBP16.76■□□□□ 0.27
SYNC-202ENST00000409190 CLCQ05315 142 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 STK32CQ86UX6 486 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 HS3ST5Q8IZT8 346 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 TTC9BQ8N6N2 239 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 EFHBQ8N7U6 833 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 AP5M1Q9H0R1 490 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 CCDC68Q9H2F9 335 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 ABCC13Q9NSE7 274 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 POLR3BQ9NW08 1133 aaPredicted RBP16.76■□□□□ 0.27
SYNC-202ENST00000409190 DGKBQ9Y6T7 804 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 DNAJB2P25686 324 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 CDC42EP1Q00587 391 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 PGBD5Q8N414 524 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 FNDC5Q8NAU1 212 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 IGSF8Q969P0 613 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 CENPNQ96H22 339 aaPredicted RBP16.76■□□□□ 0.27
SYNC-202ENST00000409190 DGCR6LQ9BY27 220 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 TRIM15Q9C019 465 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 AGPAT4Q9NRZ5 378 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 ASB1Q9Y576 335 aa16.76■□□□□ 0.27
SYNC-202ENST00000409190 C1orf232A0A0U1RR37 186 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 MUSKO15146 869 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 CACNG3O60359 315 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 PARNO95453 639 aaKnown RBP16.75■□□□□ 0.27
SYNC-202ENST00000409190 DGKQP52824 942 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 OR4D2P58180 307 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 IL1RL1Q01638 556 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 C18orf21Q32NC0 220 aaPredicted RBP16.75■□□□□ 0.27
SYNC-202ENST00000409190 BORAQ6PGQ7 559 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 LYSMD3Q7Z3D4 306 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 PATL1Q86TB9 770 aaKnown RBP16.75■□□□□ 0.27
SYNC-202ENST00000409190 FNDC8Q8TC99 324 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 MUS81Q96NY9 551 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 C9orf16Q9BUW7 83 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 NPLQ9BXD5 320 aaPredicted RBP16.75■□□□□ 0.27
SYNC-202ENST00000409190 GID8Q9NWU2 228 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 CCDC154A6NI56 674 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 IQCF5A8MTL0 148 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 H3BMQ9 156 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 MTHFD2P13995 350 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 IL7RP16871 459 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 RPS9P46781 194 aaKnown RBP16.75■□□□□ 0.27
SYNC-202ENST00000409190 TSPY1Q01534 308 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 BFSP2Q13515 415 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 ELMSAN1Q6PJG2 1045 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 KIAA0408Q6ZU52 694 aa16.75■□□□□ 0.27
SYNC-202ENST00000409190 ZC3H7AQ8IWR0 971 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms