RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.5■□□□□ 0.23
COL23A1-202ENST00000407622 PAQR3Q6TCH7 311 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 RSPO2Q6UXX9 243 aaPredicted RBP16.5■□□□□ 0.23
COL23A1-202ENST00000407622 OR7D4Q8NG98 312 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 ZFP28Q8NHY6 868 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 BRSK1Q8TDC3 778 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 ZNF296Q8WUU4 475 aaPredicted RBP16.5■□□□□ 0.23
COL23A1-202ENST00000407622 EXOC2Q96KP1 924 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 MRGBPQ9NV56 204 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 HCSTQ9UBK5 93 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 EGFL7Q9UHF1 273 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 POLG2Q9UHN1 485 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 GBF1Q92538 1859 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 FKTNO75072 461 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 VNN2O95498 520 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 CST5P28325 142 aaPredicted RBP16.5■□□□□ 0.23
COL23A1-202ENST00000407622 EEF1DP29692 281 aaKnown RBP16.5■□□□□ 0.23
COL23A1-202ENST00000407622 FMO4P31512 558 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 USP41Q3LFD5 358 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 DUS3LQ96G46 650 aaKnown RBP16.5■□□□□ 0.23
COL23A1-202ENST00000407622 CDKN2AIPNLQ96HQ2 116 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 MPP4Q96JB8 637 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 TRIB3Q96RU7 358 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 UHRF1Q96T88 793 aaPredicted RBP16.5■□□□□ 0.23
COL23A1-202ENST00000407622 SEPT5Q99719 369 aaPredicted RBP16.5■□□□□ 0.23
COL23A1-202ENST00000407622 ZBED2Q9BTP6 218 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 GPR62Q9BZJ7 368 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 OCEL1Q9H607 264 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 VCX3AQ9NNX9 186 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 SEMA4BQ9NPR2 832 aaPredicted RBP16.5■□□□□ 0.23
COL23A1-202ENST00000407622 TIMM22Q9Y584 194 aa16.5■□□□□ 0.23
COL23A1-202ENST00000407622 CHD5Q8TDI0 1954 aa16.49■□□□□ 0.23
COL23A1-202ENST00000407622 SUPT3HB4E1H0 165 aa16.49■□□□□ 0.23
COL23A1-202ENST00000407622 SOCS2O14508 198 aa16.49■□□□□ 0.23
COL23A1-202ENST00000407622 SUPT3HO75486 399 aa16.49■□□□□ 0.23
COL23A1-202ENST00000407622 FGF4P08620 206 aa16.49■□□□□ 0.23
COL23A1-202ENST00000407622 TACR2P21452 398 aa16.49■□□□□ 0.23
COL23A1-202ENST00000407622 HOXD9P28356 352 aaPredicted RBP16.49■□□□□ 0.23
COL23A1-202ENST00000407622 PRDX3P30048 256 aaKnown RBP16.49■□□□□ 0.23
COL23A1-202ENST00000407622 SLC6A4P31645 630 aa16.49■□□□□ 0.23
COL23A1-202ENST00000407622 CREB5Q02930 508 aa16.49■□□□□ 0.23
COL23A1-202ENST00000407622 FAM171A1Q5VUB5 890 aa16.49■□□□□ 0.23
COL23A1-202ENST00000407622 LGI2Q8N0V4 545 aa16.49■□□□□ 0.23
COL23A1-202ENST00000407622 PPWD1Q96BP3 646 aaKnown RBP16.49■□□□□ 0.23
COL23A1-202ENST00000407622 TUBGCP3Q96CW5 907 aa16.49■□□□□ 0.23
COL23A1-202ENST00000407622 SLC30A3Q99726 388 aa16.49■□□□□ 0.23
COL23A1-202ENST00000407622 CCDC160A6NGH7 325 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 NCF1BA6NI72 391 aaPredicted RBP16.48■□□□□ 0.23
COL23A1-202ENST00000407622 NCF1CA8MVU1 366 aaPredicted RBP16.48■□□□□ 0.23
COL23A1-202ENST00000407622 CDC7O00311 574 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 RTN3O95197 1032 aaPredicted RBP16.48■□□□□ 0.23
COL23A1-202ENST00000407622 HGFP14210 728 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 NCF1P14598 390 aaPredicted RBP16.48■□□□□ 0.23
COL23A1-202ENST00000407622 DIO3P55073 304 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 PTPRRQ15256 657 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 TSNQ15631 228 aaKnown RBP16.48■□□□□ 0.23
COL23A1-202ENST00000407622 TYSND1Q2T9J0 566 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 FAM26DQ5JW98 314 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 SLC15A3Q8IY34 581 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 OR2T34Q8NGX1 318 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 OR2T3Q8NH03 318 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 ROPN1LQ96C74 230 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 TEX37Q96LM6 180 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 CMTM6Q9NX76 183 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 PLK2Q9NYY3 685 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 NDUFA13Q9P0J0 144 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 A0A0U1RQS6 177 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 TMEM189-UBE2V1I3L0A0 370 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 RHOBTB1O94844 696 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 RPLP2P05387 115 aaKnown RBP16.48■□□□□ 0.23
COL23A1-202ENST00000407622 RPL10P27635 214 aaKnown RBP16.48■□□□□ 0.23
COL23A1-202ENST00000407622 MAGEA11P43364 429 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 AGTR2P50052 363 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 ZNF140P52738 457 aaPredicted RBP16.48■□□□□ 0.23
COL23A1-202ENST00000407622 TXNL4AP83876 142 aaKnown RBP16.48■□□□□ 0.23
COL23A1-202ENST00000407622 CLCQ05315 142 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 CARM1Q86X55 608 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 SPPL2CQ8IUH8 684 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 MIER2Q8N344 545 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 MDGA1Q8NFP4 955 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 OR4K2Q8NGD2 314 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 RHEBL1Q8TAI7 183 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 DIS3LQ8TF46 1054 aaKnown RBP16.48■□□□□ 0.23
COL23A1-202ENST00000407622 GIPC2Q8TF65 315 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 PBXIP1Q96AQ6 731 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 ZFRQ96KR1 1074 aaKnown RBP16.48■□□□□ 0.23
COL23A1-202ENST00000407622 RPL10LQ96L21 214 aaKnown RBP16.48■□□□□ 0.23
COL23A1-202ENST00000407622 TFB2MQ9H5Q4 396 aaKnown RBP16.48■□□□□ 0.23
COL23A1-202ENST00000407622 TLR8Q9NR97 1041 aaKnown RBP16.48■□□□□ 0.23
COL23A1-202ENST00000407622 DUS2Q9NX74 493 aaKnown RBP16.48■□□□□ 0.23
COL23A1-202ENST00000407622 ABCD2Q9UBJ2 740 aa16.48■□□□□ 0.23
COL23A1-202ENST00000407622 FAM149AA5PLN7 773 aa16.47■□□□□ 0.23
COL23A1-202ENST00000407622 AKAP10O43572 662 aa16.47■□□□□ 0.23
COL23A1-202ENST00000407622 ECI2O75521 394 aa16.47■□□□□ 0.23
COL23A1-202ENST00000407622 SERPINF2P08697 491 aa16.47■□□□□ 0.23
COL23A1-202ENST00000407622 OGNP20774 298 aaKnown RBP16.47■□□□□ 0.23
COL23A1-202ENST00000407622 PRKCQQ04759 706 aa16.47■□□□□ 0.23
COL23A1-202ENST00000407622 DYNC1I2Q13409 638 aaKnown RBP16.47■□□□□ 0.23
COL23A1-202ENST00000407622 TRAF7Q6Q0C0 670 aa16.47■□□□□ 0.23
COL23A1-202ENST00000407622 SCIMPQ6UWF3 145 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms