RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 PAGE1O75459 146 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 LPOP22079 712 aaPredicted RBP11.03□□□□□ -0.64
HPS4-202ENST00000398145 ADORA2AP29274 412 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 CCNIQ14094 377 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 OGFOD2Q6N063 350 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 MZT2BQ6NZ67 158 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 CCDC149Q6ZUS6 474 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 GALNT5Q7Z7M9 940 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 SMYD1Q8NB12 490 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 CAMKK2Q96RR4 588 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 TMEM9Q9P0T7 183 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 GNPTGQ9UJJ9 305 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 SESN1Q9Y6P5 492 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 ATRNL1Q5VV63 1379 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 A0A1W2PPW3 197 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 J3QRK9 145 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 TOR1BO14657 336 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 EFCAB14O75071 495 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 CAPN1P07384 714 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 GM2AP17900 193 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 PPP2R1BP30154 601 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 TRPV3Q8NET8 790 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 FBXL8Q96CD0 374 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 ITCHQ96J02 903 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 VPS35Q96QK1 796 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 SLC39A3Q9BRY0 314 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 FZD8Q9H461 694 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 RPRD1BQ9NQG5 326 aaKnown RBP11.03□□□□□ -0.64
HPS4-202ENST00000398145 CLN6Q9NWW5 311 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 PSME2Q9UL46 239 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 DYRK1BQ9Y463 629 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 PSAT1Q9Y617 370 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 SMIM28A0A1B0GU29 152 aa11.02□□□□□ -0.64
HPS4-202ENST00000398145 PABPC1P11940 636 aaKnown RBP11.02□□□□□ -0.64
HPS4-202ENST00000398145 SLC39A12Q504Y0 691 aa11.02□□□□□ -0.64
HPS4-202ENST00000398145 NCBP2-AS2Q69YL0 99 aa11.02□□□□□ -0.64
HPS4-202ENST00000398145 KIAA0930Q6ICG6 404 aaPredicted RBP11.02□□□□□ -0.64
HPS4-202ENST00000398145 OR52E8Q6IFG1 317 aa11.02□□□□□ -0.64
HPS4-202ENST00000398145 TMEM110Q86TL2 294 aa11.02□□□□□ -0.64
HPS4-202ENST00000398145 SIAH1Q8IUQ4 282 aa11.02□□□□□ -0.64
HPS4-202ENST00000398145 MYLPFQ96A32 169 aa11.02□□□□□ -0.64
HPS4-202ENST00000398145 TBATAQ96M53 351 aa11.02□□□□□ -0.64
HPS4-202ENST00000398145 SERHL2Q9H4I8 314 aa11.02□□□□□ -0.64
HPS4-202ENST00000398145 SERHLQ9NQF3 203 aa11.02□□□□□ -0.64
HPS4-202ENST00000398145 TLL2Q9Y6L7 1015 aa11.02□□□□□ -0.64
HPS4-202ENST00000398145 ZBTB14O43829 449 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 IL1BP01584 269 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 SCNN1GP51170 649 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 ST8SIA6P61647 398 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 MFSD10Q14728 455 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 MED22Q15528 200 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 ARMC12Q5T9G4 340 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 ERMP1Q7Z2K6 904 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 CYP4Z2PQ8N1L4 340 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 ZFP28Q8NHY6 868 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 SPRTNQ9H040 489 aaPredicted RBP11.02□□□□□ -0.65
HPS4-202ENST00000398145 AGO3Q9H9G7 860 aaKnown RBP11.02□□□□□ -0.65
HPS4-202ENST00000398145 SPATA2Q9UM82 520 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 MYH13Q9UKX3 1938 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 TMEM233B4DJY2 109 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 UBXN8O00124 270 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 TFECO14948 347 aaPredicted RBP11.02□□□□□ -0.65
HPS4-202ENST00000398145 RPLP2P05387 115 aaKnown RBP11.02□□□□□ -0.65
HPS4-202ENST00000398145 CDH5P33151 784 aaPredicted RBP11.02□□□□□ -0.65
HPS4-202ENST00000398145 HPCAL1P37235 193 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 SLC1A2P43004 574 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 GNPDA1P46926 289 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 MBTD1Q05BQ5 628 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 CAMK2GQ13555 558 aaPredicted RBP11.02□□□□□ -0.65
HPS4-202ENST00000398145 MOGQ16653 247 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 MYLK3Q32MK0 819 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 ZFP69Q49AA0 526 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 EIF3MQ7L2H7 374 aaKnown RBP11.02□□□□□ -0.65
HPS4-202ENST00000398145 C11orf96Q7Z7L8 435 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 TLK2Q86UE8 772 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 CDH24Q86UP0 819 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 DCBLD1Q8N8Z6 715 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 CDK5RAP1Q96SZ6 601 aaKnown RBP11.02□□□□□ -0.65
HPS4-202ENST00000398145 EMILIN2Q9BXX0 1053 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 ASB8Q9H765 288 aa11.02□□□□□ -0.65
HPS4-202ENST00000398145 INTS10Q9NVR2 710 aaKnown RBP11.02□□□□□ -0.65
HPS4-202ENST00000398145 HTRA2O43464 458 aaPredicted RBP11.01□□□□□ -0.65
HPS4-202ENST00000398145 EGFRP00533 1210 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 ALDOAP04075 364 aaKnown RBP11.01□□□□□ -0.65
HPS4-202ENST00000398145 OR56A5P0C7T3 313 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 RAP2AP10114 183 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 CRATP43155 626 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 YAP1P46937 504 aaKnown RBP11.01□□□□□ -0.65
HPS4-202ENST00000398145 DAG1Q14118 895 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 GALNT3Q14435 633 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 ZNF284Q2VY69 593 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 ZC3HC1Q86WB0 502 aaKnown RBP11.01□□□□□ -0.65
HPS4-202ENST00000398145 SCAIQ8N9R8 606 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 CLEC4CQ8WTT0 213 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 FAR1Q8WVX9 515 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 MED8Q96G25 268 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 DKK3Q9UBP4 350 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 SFMBT1Q9UHJ3 866 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 TELO2Q9Y4R8 837 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 PRR23AA6NEV1 266 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms