RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SCRN2Q96FV2 425 aa19.29■□□□□ 0.68
PDLIM2-204ENST00000397760 TBATAQ96M53 351 aa19.29■□□□□ 0.68
PDLIM2-204ENST00000397760 SIKE1Q9BRV8 207 aa19.29■□□□□ 0.68
PDLIM2-204ENST00000397760 NLE1Q9NVX2 485 aaPredicted RBP19.29■□□□□ 0.68
PDLIM2-204ENST00000397760 TXNDC16Q9P2K2 825 aa19.29■□□□□ 0.68
PDLIM2-204ENST00000397760 CAPN8A6NHC0 703 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 LOC730098B7Z3J9 87 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 LIN7AO14910 233 aaPredicted RBP19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 NPC1O15118 1278 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 RPP40O75818 363 aaKnown RBP19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 TPBGLP0DKB5 382 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 TIE1P35590 1138 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 KIR2DL1P43626 348 aaPredicted RBP19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 ZBTB16Q05516 673 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 TDGQ13569 410 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 TMEM196Q5HYL7 178 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 IER5LQ5T953 404 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 LYSMD3Q7Z3D4 306 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 OR6P1Q8NGX9 317 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 FAM129BQ96TA1 746 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 PRSS16Q9NQE7 514 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 PRDM6Q9NQX0 595 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 LRRC42Q9Y546 428 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 PSAT1Q9Y617 370 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 TICRRQ7Z2Z1 1910 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 C1orf232A0A0U1RR37 186 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 STX7O15400 261 aaKnown RBP19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 SLC7A4O43246 635 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 EGFP01133 1207 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 GLULP15104 373 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 GCKP35557 465 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 WASP42768 502 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 CLNS1AP54105 237 aaKnown RBP19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 GRSF1Q12849 480 aaKnown RBP eCLIP19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 ENPP2Q13822 863 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 TBCCQ15814 346 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 POM121L1PQ3SYA9 428 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 FSTL4Q6MZW2 842 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 NEPROQ6NW34 567 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 PACS1Q6VY07 963 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 KYAT3Q6YP21 454 aaKnown RBP19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 ARHGAP24Q8N264 748 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 TMIEQ8NEW7 156 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 HCAR2Q8TDS4 363 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 LYSMD1Q96S90 227 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 CPNE1Q99829 537 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 C12orf65Q9H3J6 166 aaKnown RBP19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 DKK3Q9UBP4 350 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 SARDHQ9UL12 918 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 PPM1HQ9ULR3 514 aa19.28■□□□□ 0.68
PDLIM2-204ENST00000397760 TSPAN11A1L157 253 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 NPIPB15A6NHN6 443 aaPredicted RBP19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 A8MX80 341 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 KPNA3O00505 521 aaPredicted RBP19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 SRFP11831 508 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 DRD1P21728 446 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 PSMA3P25788 255 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 HMGCLP35914 325 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 GP5P40197 560 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 CDKN3Q16667 212 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 UGP2Q16851 508 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 TPRG1Q6ZUI0 275 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 PTAR1Q7Z6K3 402 aaPredicted RBP19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 STRA8Q7Z7C7 330 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 CNTN4Q8IWV2 1026 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 GPATCH11Q8N954 259 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 MAFAQ8NHW3 353 aaPredicted RBP19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 CDKN2AIPNLQ96HQ2 116 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 MCCC1Q96RQ3 725 aaPredicted RBP19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 FAM167BQ9BTA0 163 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 MFSD1Q9H3U5 465 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 SUDS3Q9H7L9 328 aaPredicted RBP19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 ZFYVE1Q9HBF4 777 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 BPIFA1Q9NP55 256 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 SLC2A4RGQ9NR83 387 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 POLR3BQ9NW08 1133 aaPredicted RBP19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 NSMCE4AQ9NXX6 385 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 IL17CQ9P0M4 197 aa19.27■□□□□ 0.68
PDLIM2-204ENST00000397760 ANKRD36A6QL64 1941 aa19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 MYLKQ15746 1914 aa19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 C16orf96A6NNT2 1141 aa19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 CLDN7O95471 211 aa19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 RPSAP08865 295 aaKnown RBP19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 TIMP2P16035 220 aa19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 SERPINB3P29508 390 aa19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 OCRLQ01968 901 aa19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 SEMG2Q02383 582 aa19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 SLC44A4Q53GD3 710 aa19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 LRRC73Q5JTD7 316 aa19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 CRTC1Q6UUV9 634 aa19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 CDHR3Q6ZTQ4 885 aa19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 PIP4K2CQ8TBX8 421 aa19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 CALML6Q8TD86 181 aa19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 EID2BQ96D98 161 aa19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 ERLEC1Q96DZ1 483 aa19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 WWP1Q9H0M0 922 aa19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 PKP3Q9Y446 797 aa19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 MUC22E2RYF6 1773 aaPredicted RBP19.26■□□□□ 0.67
PDLIM2-204ENST00000397760 CCDC162PA2VCL2 907 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms