RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 XIAPP98170 497 aa23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 PEX6Q13608 980 aa23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 SIM2Q14190 667 aaPredicted RBP23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 SLMAPQ14BN4 828 aa23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 CHRNA6Q15825 494 aa23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 STEAP4Q687X5 459 aa23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 RAET1GQ6H3X3 334 aa23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 KIAA0930Q6ICG6 404 aaPredicted RBP23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 CAPN12Q6ZSI9 719 aa23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 MICALCLQ6ZW33 695 aa23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 NLRP8Q86W28 1048 aa23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 TRAM1L1Q8N609 369 aa23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 DENND6BQ8NEG7 585 aa23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 AGAP2Q99490 1192 aa23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 EIF2B4Q9UI10 523 aaKnown RBP23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 FAM169AQ9Y6X4 670 aa23.49■■□□□ 1.35
TSPAN4-203ENST00000397397 OR51F1A6NGY5 319 aa23.48■■□□□ 1.35
TSPAN4-203ENST00000397397 PRAMEF26H0Y7S4 382 aa23.48■■□□□ 1.35
TSPAN4-203ENST00000397397 CTIFO43310 598 aaKnown RBP23.48■■□□□ 1.35
TSPAN4-203ENST00000397397 RHOBTB1O94844 696 aa23.48■■□□□ 1.35
TSPAN4-203ENST00000397397 VAPBO95292 243 aa23.48■■□□□ 1.35
TSPAN4-203ENST00000397397 PTGER3P43115 390 aa23.48■■□□□ 1.35
TSPAN4-203ENST00000397397 GPR1P46091 355 aa23.48■■□□□ 1.35
TSPAN4-203ENST00000397397 SMAD1Q15797 465 aaKnown RBP23.48■■□□□ 1.35
TSPAN4-203ENST00000397397 WDR45BQ5MNZ6 344 aa23.48■■□□□ 1.35
TSPAN4-203ENST00000397397 AFTPHQ6ULP2 937 aa23.48■■□□□ 1.35
TSPAN4-203ENST00000397397 RELL1Q8IUW5 271 aa23.48■■□□□ 1.35
TSPAN4-203ENST00000397397 RGL4Q8IZJ4 473 aa23.48■■□□□ 1.35
TSPAN4-203ENST00000397397 PELI3Q8N2H9 469 aa23.48■■□□□ 1.35
TSPAN4-203ENST00000397397 PLA2G15Q8NCC3 412 aa23.48■■□□□ 1.35
TSPAN4-203ENST00000397397 SERAC1Q96JX3 654 aa23.48■■□□□ 1.35
TSPAN4-203ENST00000397397 ZSCAN5AQ9BUG6 496 aa23.48■■□□□ 1.35
TSPAN4-203ENST00000397397 PLAC1Q9HBJ0 212 aa23.48■■□□□ 1.35
TSPAN4-203ENST00000397397 SLC30A1Q9Y6M5 507 aa23.48■■□□□ 1.35
TSPAN4-203ENST00000397397 K7ESM1 405 aa23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 GAPDHSO14556 408 aaPredicted RBP23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 FPGTO14772 594 aa23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 SRP72O76094 671 aaKnown RBP23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 PRAMEF1O95521 474 aa23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 GOT2P00505 430 aaKnown RBP23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 MAOBP27338 520 aa23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 IGFALSP35858 605 aa23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 LONRF1Q17RB8 773 aa23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 ZRANB3Q5FWF4 1079 aa23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 PNCKQ6P2M8 343 aa23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 PRR23BQ6ZRT6 265 aa23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 OR4L1Q8NH43 312 aa23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 ZNF398Q8TD17 642 aa23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 ZC3H10Q96K80 434 aaKnown RBP23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 ORAI3Q9BRQ5 295 aa23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 MIR1-1HGQ9H1L0 117 aa23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 CDC42EP4Q9H3Q1 356 aaKnown RBP23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 NINJ2Q9NZG7 142 aa23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 CA5BQ9Y2D0 317 aa23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 R4GN57 208 aa23.47■■□□□ 1.35
TSPAN4-203ENST00000397397 TSHRP16473 764 aa23.46■■□□□ 1.35
TSPAN4-203ENST00000397397 ITGALP20701 1170 aa23.46■■□□□ 1.35
TSPAN4-203ENST00000397397 SSTR1P30872 391 aa23.46■■□□□ 1.35
TSPAN4-203ENST00000397397 ARCN1P48444 511 aaKnown RBP23.46■■□□□ 1.35
TSPAN4-203ENST00000397397 CLDN2P57739 230 aa23.46■■□□□ 1.35
TSPAN4-203ENST00000397397 KYNUQ16719 465 aa23.46■■□□□ 1.35
TSPAN4-203ENST00000397397 LYSMD4Q5XG99 296 aa23.46■■□□□ 1.35
TSPAN4-203ENST00000397397 ZC3H14Q6PJT7 736 aaKnown RBP23.46■■□□□ 1.35
TSPAN4-203ENST00000397397 ALYREFQ86V81 257 aaKnown RBP23.46■■□□□ 1.35
TSPAN4-203ENST00000397397 GSDMBQ8TAX9 411 aa23.46■■□□□ 1.35
TSPAN4-203ENST00000397397 DTX3LQ8TDB6 740 aa23.46■■□□□ 1.35
TSPAN4-203ENST00000397397 FAM96AQ9H5X1 160 aa23.46■■□□□ 1.35
TSPAN4-203ENST00000397397 ASB8Q9H765 288 aa23.46■■□□□ 1.35
TSPAN4-203ENST00000397397 LRRC4CQ9HCJ2 640 aa23.46■■□□□ 1.35
TSPAN4-203ENST00000397397 C20orf96Q9NUD7 363 aaPredicted RBP23.46■■□□□ 1.35
TSPAN4-203ENST00000397397 IL1RAPL1Q9NZN1 696 aa23.46■■□□□ 1.35
TSPAN4-203ENST00000397397 HS3ST3A1Q9Y663 406 aa23.46■■□□□ 1.35
TSPAN4-203ENST00000397397 FANCMQ8IYD8 2048 aa23.46■■□□□ 1.35
TSPAN4-203ENST00000397397 FADS2P1A8MWK0 482 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 UGT1A9O60656 530 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 SOD1P00441 154 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 PYGLP06737 847 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 UGT1A6P19224 532 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 UGT1A1P22309 533 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 UGT1A4P22310 534 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 ARNTP27540 789 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 UGT1A3P35503 534 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 UGT1A5P35504 534 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 NBL1P41271 181 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 GPX6P59796 221 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 CACNG1Q06432 222 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 ITGA9Q13797 1035 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 INPP5AQ14642 412 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 STAT4Q14765 748 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 ATP13A5Q4VNC0 1218 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 C3orf62Q6ZUJ4 267 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 SNX20Q7Z614 316 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 PTAR1Q7Z6K3 402 aaPredicted RBP23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 UNC5BQ8IZJ1 945 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 DNASE2BQ8WZ79 361 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 SLC6A18Q96N87 628 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 TTC25Q96NG3 672 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 VPS37BQ9H9H4 285 aa23.45■■□□□ 1.34
TSPAN4-203ENST00000397397 UGT1A7Q9HAW7 530 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms