RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CDK18Q07002 472 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 WASHC5Q12768 1159 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 HES3Q5TGS1 186 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 ADAMTSL4Q6UY14 1074 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 B4GALNT4Q76KP1 1039 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 ZC3H18Q86VM9 953 aaKnown RBP14.51□□□□□ -0.09
SEC13-208ENST00000397109 PELI3Q8N2H9 469 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 RASGEF1CQ8N431 466 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 PDCD7Q8N8D1 485 aaKnown RBP14.51□□□□□ -0.09
SEC13-208ENST00000397109 COG1Q8WTW3 980 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 NAT6Q93015 286 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 PDXPQ96GD0 296 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 QKIQ96PU8 341 aaKnown RBP eCLIP14.51□□□□□ -0.09
SEC13-208ENST00000397109 SMIM14Q96QK8 99 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 NAP1L3Q99457 506 aaPredicted RBP14.51□□□□□ -0.09
SEC13-208ENST00000397109 ANKZF1Q9H8Y5 726 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 FGF22Q9HCT0 170 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 PKD2L2Q9NZM6 624 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 TRHDEQ9UKU6 1024 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 U3KQA8 63 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 AKAP13Q12802 2813 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 PRSS38A1L453 326 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 FAM149AA5PLN7 773 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 H7C0C1 242 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 ZNF185O15231 689 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 ZNF189O75820 626 aaPredicted RBP14.5□□□□□ -0.09
SEC13-208ENST00000397109 TJP3O95049 919 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 TNNT3P45378 269 aaPredicted RBP14.5□□□□□ -0.09
SEC13-208ENST00000397109 ATP5OP48047 213 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 INSM1Q01101 510 aaPredicted RBP14.5□□□□□ -0.09
SEC13-208ENST00000397109 NOMO1Q15155 1222 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 PID1Q7Z2X4 250 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 IFI44Q8TCB0 444 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 HTR3CQ8WXA8 447 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 ZCCHC14Q8WYQ9 949 aaKnown RBP14.5□□□□□ -0.09
SEC13-208ENST00000397109 HAUS1Q96CS2 278 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 CAPZA3Q96KX2 299 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 TRIB3Q96RU7 358 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 FRMD8Q9BZ67 464 aaPredicted RBP14.5□□□□□ -0.09
SEC13-208ENST00000397109 ABCG4Q9H172 646 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 MAGEE1Q9HCI5 957 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 CYP4F12Q9HCS2 524 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 ARFGAP3Q9NP61 516 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 KLHL8Q9P2G9 620 aaPredicted RBP14.5□□□□□ -0.09
SEC13-208ENST00000397109 FAM153AQ9UHL3 310 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 MOSPD1Q9UJG1 213 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 LRP4O75096 1905 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 ACACAQ13085 2346 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 RP1P56715 2156 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 A0A0U1RQS6 177 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 CPED1A4D0V7 1026 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 CCDC188H7C350 402 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 OPA1O60313 960 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 NDST3O95803 873 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 MT-CYBP00156 380 aaPredicted RBP14.5□□□□□ -0.09
SEC13-208ENST00000397109 MYF5P13349 255 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 SPINT3P49223 89 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 KLF1Q13351 362 aaPredicted RBP14.5□□□□□ -0.09
SEC13-208ENST00000397109 CAMK2BQ13554 666 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 PCSK7Q16549 785 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 CDKN3Q16667 212 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 MAP9Q49MG5 647 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 RFLNAQ6ZTI6 216 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 EFL1Q7Z2Z2 1120 aaKnown RBP14.5□□□□□ -0.09
SEC13-208ENST00000397109 TAF8Q7Z7C8 310 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 SLC35F3Q8IY50 421 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 ARL10Q8N8L6 244 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 OR6C4Q8NGE1 309 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 SPATA22Q8NHS9 363 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 SCAMP4Q969E2 229 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 CDH19Q9H159 772 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 CCDC86Q9H6F5 360 aaKnown RBP14.5□□□□□ -0.09
SEC13-208ENST00000397109 ZFYVE1Q9HBF4 777 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 MRPL40Q9NQ50 206 aaKnown RBP14.5□□□□□ -0.09
SEC13-208ENST00000397109 RAD18Q9NS91 495 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 CD84Q9UIB8 345 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 PADI4Q9UM07 663 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 GPR34Q9UPC5 381 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 CLCA2Q9UQC9 943 aa14.5□□□□□ -0.09
SEC13-208ENST00000397109 FRYQ5TBA9 3013 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 TRABD2BA6NFA1 517 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 PMPCBO75439 489 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 MT-CO3P00414 261 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 EPOP01588 193 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 CEACAM5P06731 702 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 IVLP07476 585 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 CELA2BP08218 269 aaPredicted RBP14.49□□□□□ -0.09
SEC13-208ENST00000397109 CD68P34810 354 aaPredicted RBP14.49□□□□□ -0.09
SEC13-208ENST00000397109 TARDBPQ13148 414 aaKnown RBP eCLIP14.49□□□□□ -0.091e-7■■□□□ 14.1
SEC13-208ENST00000397109 PEX6Q13608 980 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 GALNT3Q14435 633 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 GUSBP11Q6P575 273 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 KDELC2Q7Z4H8 507 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 ZNF567Q8N184 647 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 DCBLD1Q8N8Z6 715 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 NOA1Q8NC60 698 aaKnown RBP14.49□□□□□ -0.09
SEC13-208ENST00000397109 WDR48Q8TAF3 677 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 ACTL9Q8TC94 416 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 MAPK15Q8TD08 544 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 HIC2Q96JB3 615 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms