RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 TBX21Q9UL17 535 aa15.15■□□□□ 0.02
MCF2L-205ENST00000397017 RAP2CQ9Y3L5 183 aa15.15■□□□□ 0.02
MCF2L-205ENST00000397017 ATG2BQ96BY7 2078 aa15.15■□□□□ 0.02
MCF2L-205ENST00000397017 SLC9A3R1O14745 358 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-205ENST00000397017 ATP6V1G2O95670 118 aa15.15■□□□□ 0.02
MCF2L-205ENST00000397017 ECT2LQ008S8 904 aa15.15■□□□□ 0.02
MCF2L-205ENST00000397017 SLC9B1Q4ZJI4 515 aa15.15■□□□□ 0.02
MCF2L-205ENST00000397017 LCA5Q86VQ0 697 aa15.15■□□□□ 0.02
MCF2L-205ENST00000397017 PYDC1Q8WXC3 89 aa15.15■□□□□ 0.02
MCF2L-205ENST00000397017 GFM2Q969S9 779 aaKnown RBP15.15■□□□□ 0.02
MCF2L-205ENST00000397017 BCAP29Q9UHQ4 241 aa15.15■□□□□ 0.02
MCF2L-205ENST00000397017 OTOFQ9HC10 1997 aa15.15■□□□□ 0.02
MCF2L-205ENST00000397017 FSBPO95073 299 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 PCLAFQ15004 111 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 CHRNA6Q15825 494 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 SPRED2Q7Z698 418 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 PYCR2Q96C36 320 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 CDH19Q9H159 772 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.14■□□□□ 0.01
MCF2L-205ENST00000397017 FETUBQ9UGM5 382 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 ZNF711Q9Y462 761 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 ASB3Q9Y575 518 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 GNGT2O14610 69 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 HSPA7P48741 367 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 FLOT2Q14254 428 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 CILP2Q8IUL8 1156 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 AGAP11Q8TF27 550 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 OR52B2Q96RD2 323 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 OLFM1Q99784 485 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 NOL6Q9H6R4 1146 aaKnown RBP15.14■□□□□ 0.01
MCF2L-205ENST00000397017 CWH43Q9H720 699 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 APPL1Q9UKG1 709 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 TRAF6Q9Y4K3 522 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 BRCA1P38398 1863 aaKnown RBP15.14■□□□□ 0.01
MCF2L-205ENST00000397017 SRRM3A6NNA2 597 aaPredicted RBP15.14■□□□□ 0.01
MCF2L-205ENST00000397017 OR56A5P0C7T3 313 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 THRAP10827 490 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 ITPKAP23677 461 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 MAT2AP31153 395 aaKnown RBP15.14■□□□□ 0.01
MCF2L-205ENST00000397017 PSAPL1Q6NUJ1 521 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 RBM15BQ8NDT2 890 aaKnown RBP15.14■□□□□ 0.01
MCF2L-205ENST00000397017 OR2AP1Q8NGE2 309 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 WFDC5Q8TCV5 224 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 GPR22Q99680 433 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 NPAS2Q99743 824 aa15.14■□□□□ 0.01
MCF2L-205ENST00000397017 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.13■□□□□ 0.01
MCF2L-205ENST00000397017 RAD51BO15315 384 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 HGFP14210 728 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 AP2B1P63010 937 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 BNIP1Q12981 228 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 SDE2Q6IQ49 451 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 BHLHA9Q7RTU4 235 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 TSPAN33Q86UF1 283 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 PGBD5Q8N414 524 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 RCN3Q96D15 328 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 EFCAB1Q9HAE3 211 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 CDH22Q9UJ99 828 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 SIN3BO75182 1162 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 HMGA1P17096 107 aaKnown RBP15.13■□□□□ 0.01
MCF2L-205ENST00000397017 GDF5P43026 501 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 KCNK10P57789 538 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 PITRM1Q5JRX3 1037 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 ANKRD33Q7Z3H0 272 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 TRIM74Q86UV6 250 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 TCEAL8Q8IYN2 117 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 GDPD5Q8WTR4 605 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 BRD9Q9H8M2 597 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 EIF2B4Q9UI10 523 aaKnown RBP15.13■□□□□ 0.01
MCF2L-205ENST00000397017 ANGPTL2Q9UKU9 493 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 PDZK1P1A8MUH7 402 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 PLK4O00444 970 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 GPR1P46091 355 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 PSMD8P48556 350 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 TMPRSS6Q8IU80 811 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 CLHC1Q8NHS4 586 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 PTCD2Q8WV60 388 aaKnown RBP15.13■□□□□ 0.01
MCF2L-205ENST00000397017 ACDQ96AP0 544 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 PRICKLE1Q96MT3 831 aaPredicted RBP15.13■□□□□ 0.01
MCF2L-205ENST00000397017 LENG8Q96PV6 779 aaPredicted RBP15.13■□□□□ 0.01
MCF2L-205ENST00000397017 SUV39H2Q9H5I1 410 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 ELOVL6Q9H5J4 265 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 TBC1D14Q9P2M4 693 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 GGA2Q9UJY4 613 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 CLEC4EQ9ULY5 219 aa15.13■□□□□ 0.01
MCF2L-205ENST00000397017 ARIH1Q9Y4X5 557 aaPredicted RBP15.13■□□□□ 0.01
MCF2L-205ENST00000397017 CLASP2O75122 1294 aaKnown RBP15.12■□□□□ 0.01
MCF2L-205ENST00000397017 RFC2P35250 354 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 INSCQ1MX18 579 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 ZNF648Q5T619 568 aaPredicted RBP15.12■□□□□ 0.01
MCF2L-205ENST00000397017 GK5Q6ZS86 529 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 Q6ZVL8 140 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 MMAAQ8IVH4 418 aaKnown RBP15.12■□□□□ 0.01
MCF2L-205ENST00000397017 NKAPQ8N5F7 415 aaKnown RBP15.12■□□□□ 0.01
MCF2L-205ENST00000397017 IRAK4Q9NWZ3 460 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 SAGE1Q9NXZ1 904 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 OPTCQ9UBM4 332 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 ZDHHC2Q9UIJ5 367 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 PARP14Q460N5 1801 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 ADH1CP00326 375 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 SLC35E2BP0CK96 405 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms