RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 GZMAP12544 262 aa17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 LHCGRP22888 699 aa17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 PPM1FP49593 454 aaPredicted RBP17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 NCAPHQ15003 741 aa17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 DPYSL2Q16555 572 aa17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 SKIDA1Q1XH10 827 aa17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 CLEC18BQ6UXF7 455 aa17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 ARFGAP1Q8N6T3 406 aa17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 CLEC18CQ8NCF0 446 aa17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 SLC37A2Q8TED4 501 aa17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 PMEPA1Q969W9 287 aa17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 HERPUD2Q9BSE4 406 aa17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 RMI1Q9H9A7 625 aa17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 MRPL47Q9HD33 250 aaKnown RBP17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 KCTD3Q9Y597 815 aa17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 SCINQ9Y6U3 715 aa17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 OR5K4A6NMS3 321 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 NKX2-8O15522 239 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 MMP13P45452 471 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 HHEXQ03014 270 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 CDC20Q12834 499 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 TRAF2Q12933 501 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 DOK6Q6PKX4 331 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 KDELC2Q7Z4H8 507 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 IRF2BP2Q7Z5L9 587 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 PLXDC1Q8IUK5 500 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 ATPAF2Q8N5M1 289 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 ESX1Q8N693 406 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 PIH1D2Q8WWB5 315 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 TRIM11Q96F44 468 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 PEBP4Q96S96 227 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 SYT11Q9BT88 431 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 ABCG8Q9H221 673 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 CHMP5Q9NZZ3 219 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 PCDHB3Q9Y5E6 796 aa17.39■□□□□ 0.37
EXOSC3-202ENST00000396521 KIR2DS5A0A0G2JLQ3 304 aa17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 A0A0G2JNG1 304 aa17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 KIR2DS3K7RE56 304 aa17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 POLR1CO15160 346 aaPredicted RBP17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 LRCH4O75427 683 aa17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 MYBL1P10243 752 aa17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 TCN2P20062 427 aa17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 CDK11BP21127 795 aaKnown RBP17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 CA4P22748 312 aa17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 MPSTP25325 297 aa17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 KIR2DS5Q14953 304 aa17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 LACTB2Q53H82 288 aaPredicted RBP17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 CYP4V2Q6ZWL3 525 aaPredicted RBP17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 SLC9B2Q86UD5 537 aa17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 PGBD5Q8N414 524 aa17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 FAM26EQ8N5C1 309 aa17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 ABHD17AQ96GS6 310 aa17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 COX14Q96I36 57 aa17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 TMEM9Q9P0T7 183 aa17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 AMACRQ9UHK6 382 aa17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 ZNHIT2Q9UHR6 403 aa17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 TMEM98Q9Y2Y6 226 aa17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 USP9YO00507 2555 aaPredicted RBP17.38■□□□□ 0.37
EXOSC3-202ENST00000396521 ANKRD36A6QL64 1941 aa17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 A0A0J9YYE9 177 aa17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 STK17BO94768 372 aa17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 SOD1P00441 154 aa17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 TRBC1P01850 177 aa17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 ANKRD34CP0C6C1 535 aa17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 EPHB1P54762 984 aa17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 RPL26P61254 145 aaKnown RBP17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 MYL5Q02045 173 aa17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 PTSQ03393 145 aa17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 KLRB1Q12918 225 aa17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 LRRC66Q68CR7 880 aa17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 IYDQ6PHW0 289 aa17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 POLNQ7Z5Q5 900 aa17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 TSPAN33Q86UF1 283 aa17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 ATCAYQ86WG3 371 aa17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 PTCD2Q8WV60 388 aaKnown RBP17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 STARD8Q92502 1023 aa17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 NCSTNQ92542 709 aa17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 POLR1EQ9GZS1 481 aaKnown RBP17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 TAS2R14Q9NYV8 317 aa17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 RPL26L1Q9UNX3 145 aaKnown RBP17.37■□□□□ 0.37
EXOSC3-202ENST00000396521 LOC101059948A0A1B0GTJ6 334 aa17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 TTC24A2A3L6 582 aaPredicted RBP17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 RGSL1A5PLK6 1076 aa17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 TOX3O15405 576 aaPredicted RBP17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 FZD6O60353 706 aa17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 MAP3K6O95382 1288 aa17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 ASMTLO95671 621 aa17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 RECKO95980 971 aa17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 FTLP02792 175 aaPredicted RBP17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 PRKAR1AP10644 381 aa17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 STC1P52823 247 aa17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 LYSMD3Q7Z3D4 306 aa17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 TEX26Q8N6G2 289 aa17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 CSPG4P5Q96PW8 444 aa17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 UCK1Q9HA47 277 aa17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 ZNF71Q9NQZ8 489 aaPredicted RBP17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 ANO10Q9NW15 660 aa17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 RCOR3Q9P2K3 495 aaPredicted RBP17.36■□□□□ 0.37
EXOSC3-202ENST00000396521 CNOT8Q9UFF9 292 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms