RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 GABPB2Q8TAK5 448 aaPredicted RBP21.2■□□□□ 0.98
FXN-202ENST00000396364 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.2■□□□□ 0.98
FXN-202ENST00000396364 DNAJC1Q96KC8 554 aaKnown RBP21.2■□□□□ 0.98
FXN-202ENST00000396364 TTC1Q99614 292 aa21.2■□□□□ 0.98
FXN-202ENST00000396364 HINFPQ9BQA5 517 aa21.2■□□□□ 0.98
FXN-202ENST00000396364 APOOQ9BUR5 198 aa21.2■□□□□ 0.98
FXN-202ENST00000396364 ZDHHC5Q9C0B5 715 aa21.2■□□□□ 0.98
FXN-202ENST00000396364 PHACTR1Q9C0D0 580 aa21.2■□□□□ 0.98
FXN-202ENST00000396364 CHRAC1Q9NRG0 131 aa21.2■□□□□ 0.98
FXN-202ENST00000396364 TMEM74BQ9NUR3 256 aa21.2■□□□□ 0.98
FXN-202ENST00000396364 GRHL1Q9NZI5 618 aa21.2■□□□□ 0.98
FXN-202ENST00000396364 ZNF106Q9H2Y7 1883 aaKnown RBP21.2■□□□□ 0.98
FXN-202ENST00000396364 MUC6Q6W4X9 2439 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 FAM237BA0A1B0GVD1 139 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 POM121BA6NF01 834 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 TLR4O00206 839 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 PRAMEF1O95521 474 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 RHOXF2BP0C7M4 288 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 TRIM23P36406 574 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 PFN3P60673 137 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 CRADDP78560 199 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 NHLH1Q02575 133 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 GPR33Q49SQ1 333 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 TRIM61Q5EBN2 209 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 FAM151BQ6UXP7 276 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 PHYKPLQ8IUZ5 450 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 OXR1Q8N573 874 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 IFT81Q8WYA0 676 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 RUBCNQ92622 972 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 ULK4Q96C45 1275 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 CDKN2AIPNLQ96HQ2 116 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 BMFQ96LC9 184 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 RHOXF2Q9BQY4 288 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 IL26Q9NPH9 171 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 GDF3Q9NR23 364 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 DMGDHQ9UI17 866 aaKnown RBP21.19■□□□□ 0.98
FXN-202ENST00000396364 FKBPLQ9UIM3 349 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 KCTD3Q9Y597 815 aa21.19■□□□□ 0.98
FXN-202ENST00000396364 A0A1W2PR77 199 aa21.18■□□□□ 0.98
FXN-202ENST00000396364 SRP72O76094 671 aaKnown RBP21.18■□□□□ 0.98
FXN-202ENST00000396364 MYCLP1P12525 358 aaPredicted RBP21.18■□□□□ 0.98
FXN-202ENST00000396364 PGAM1P18669 254 aa21.18■□□□□ 0.98
FXN-202ENST00000396364 PSMA3P25788 255 aa21.18■□□□□ 0.98
FXN-202ENST00000396364 PPARGP37231 505 aaPredicted RBP21.18■□□□□ 0.98
FXN-202ENST00000396364 CSNK1EP49674 416 aaKnown RBP21.18■□□□□ 0.98
FXN-202ENST00000396364 KIAA1024LP59773 190 aa21.18■□□□□ 0.98
FXN-202ENST00000396364 DHX9Q08211 1270 aaKnown RBP21.18■□□□□ 0.98
FXN-202ENST00000396364 AFTPHQ6ULP2 937 aa21.18■□□□□ 0.98
FXN-202ENST00000396364 RFLNAQ6ZTI6 216 aa21.18■□□□□ 0.98
FXN-202ENST00000396364 HEATR4Q86WZ0 1026 aa21.18■□□□□ 0.98
FXN-202ENST00000396364 PLA2G15Q8NCC3 412 aa21.18■□□□□ 0.98
FXN-202ENST00000396364 FBXO25Q8TCJ0 367 aa21.18■□□□□ 0.98
FXN-202ENST00000396364 HIC2Q96JB3 615 aa21.18■□□□□ 0.98
FXN-202ENST00000396364 SIGLEC10Q96LC7 697 aa21.18■□□□□ 0.98
FXN-202ENST00000396364 VPS35Q96QK1 796 aa21.18■□□□□ 0.98
FXN-202ENST00000396364 TEX101Q9BY14 249 aa21.18■□□□□ 0.98
FXN-202ENST00000396364 ZCCHC2Q9C0B9 1178 aaKnown RBP21.18■□□□□ 0.98
FXN-202ENST00000396364 ASB8Q9H765 288 aa21.18■□□□□ 0.98
FXN-202ENST00000396364 RPS6KL1Q9Y6S9 549 aa21.18■□□□□ 0.98
FXN-202ENST00000396364 ESYT3A0FGR9 886 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 CCDC78A2IDD5 438 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 H0Y8X5 98 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 DFNA5O60443 496 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 USP1O94782 785 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 MC4RP32245 332 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 ATXN3P54252 364 aaPredicted RBP21.17■□□□□ 0.98
FXN-202ENST00000396364 CDK3Q00526 305 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 ACVR1Q04771 509 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 PDIA2Q13087 525 aaKnown RBP21.17■□□□□ 0.98
FXN-202ENST00000396364 PDE1CQ14123 709 aaPredicted RBP21.17■□□□□ 0.98
FXN-202ENST00000396364 NFATC4Q14934 902 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 FNBP1LQ5T0N5 605 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 MACC1Q6ZN28 852 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 SNX20Q7Z614 316 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 OR13H1Q8NG92 308 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 OR6P1Q8NGX9 317 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 GDAP1Q8TB36 358 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 ZNF398Q8TD17 642 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 UBXN4Q92575 508 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 GLYATL1Q969I3 302 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 EBNA1BP2Q99848 306 aaKnown RBP21.17■□□□□ 0.98
FXN-202ENST00000396364 CRLS1Q9UJA2 301 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 CA5BQ9Y2D0 317 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 ANKRD6Q9Y2G4 727 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 OR1A2Q9Y585 309 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 RALGAPA1Q6GYQ0 2036 aa21.17■□□□□ 0.98
FXN-202ENST00000396364 K7ESM1 405 aa21.16■□□□□ 0.98
FXN-202ENST00000396364 PFDN6O15212 129 aa21.16■□□□□ 0.98
FXN-202ENST00000396364 SLC25A14O95258 325 aaPredicted RBP21.16■□□□□ 0.98
FXN-202ENST00000396364 CACNG1Q06432 222 aa21.16■□□□□ 0.98
FXN-202ENST00000396364 CBLBQ13191 982 aa21.16■□□□□ 0.98
FXN-202ENST00000396364 NFATC2Q13469 925 aa21.16■□□□□ 0.98
FXN-202ENST00000396364 PTPRCAPQ14761 206 aa21.16■□□□□ 0.98
FXN-202ENST00000396364 CHRNA6Q15825 494 aa21.16■□□□□ 0.98
FXN-202ENST00000396364 ZRANB3Q5FWF4 1079 aa21.16■□□□□ 0.98
FXN-202ENST00000396364 AARS2Q5JTZ9 985 aaKnown RBP21.16■□□□□ 0.98
FXN-202ENST00000396364 PLA2G2CQ5R387 149 aa21.16■□□□□ 0.98
FXN-202ENST00000396364 LDLRAP1Q5SW96 308 aa21.16■□□□□ 0.98
FXN-202ENST00000396364 LYPLAL1Q5VWZ2 237 aa21.16■□□□□ 0.98
FXN-202ENST00000396364 TMEM135Q86UB9 458 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms