RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 CACNA2D2Q9NY47 1150 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 FKBPLQ9UIM3 349 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 PCDHGA7Q9Y5G6 932 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 DNAJC15Q9Y5T4 150 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 SYCE1LA8MT33 242 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 STX16-NPEPL1H3BU86 382 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 TRIM38O00635 465 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 FBP2O00757 339 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 STX16O14662 325 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 ACOT8O14734 319 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 AZIN1O14977 448 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 CFLARO15519 480 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 TBL1XO60907 577 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 VPS26AO75436 327 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 SIX3O95343 332 aaPredicted RBP16.71■□□□□ 0.27
NUP50-202ENST00000396096 SNRPB2P08579 225 aaKnown RBP16.71■□□□□ 0.27
NUP50-202ENST00000396096 TSPAN8P19075 237 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 MC4RP32245 332 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 CDH13P55290 713 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 RPL26P61254 145 aaKnown RBP16.71■□□□□ 0.27
NUP50-202ENST00000396096 PSME3P61289 254 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 IRX1P78414 480 aaPredicted RBP16.71■□□□□ 0.27
NUP50-202ENST00000396096 SMAD3P84022 425 aaKnown RBP16.71■□□□□ 0.27
NUP50-202ENST00000396096 TWF1Q12792 350 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 PTPRNQ16849 979 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 AGKQ53H12 422 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 AARS2Q5JTZ9 985 aaKnown RBP16.71■□□□□ 0.27
NUP50-202ENST00000396096 REP15Q6BDI9 236 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 PSAPL1Q6NUJ1 521 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 Q6ZNB5 142 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 PIANPQ8IYJ0 282 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 PLCD3Q8N3E9 789 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 ADAMTS19Q8TE59 1207 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 VWCEQ96DN2 955 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 ALG14Q96F25 216 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 TMEM169Q96HH4 297 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 SMIM14Q96QK8 99 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 GPR21Q99679 349 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 FEM1AQ9BSK4 669 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 MID1IP1Q9NPA3 183 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 PACSIN3Q9UKS6 424 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 IKZF3Q9UKT9 509 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 RNF112Q9ULX5 631 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 TMCO1Q9UM00 188 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 FAM50BQ9Y247 325 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 MAGEA13PA6NCF6 341 aa16.7■□□□□ 0.26
NUP50-202ENST00000396096 H0Y626 953 aa16.7■□□□□ 0.26
NUP50-202ENST00000396096 STX7O15400 261 aaKnown RBP16.7■□□□□ 0.26
NUP50-202ENST00000396096 CLASP2O75122 1294 aaKnown RBP16.7■□□□□ 0.26
NUP50-202ENST00000396096 ECI2O75521 394 aa16.7■□□□□ 0.26
NUP50-202ENST00000396096 RPS17P08708 135 aaKnown RBP16.7■□□□□ 0.26
NUP50-202ENST00000396096 GFAPP14136 432 aa16.7■□□□□ 0.26
NUP50-202ENST00000396096 ARSAP15289 507 aa16.7■□□□□ 0.26
NUP50-202ENST00000396096 MZF1P28698 734 aaPredicted RBP16.7■□□□□ 0.26
NUP50-202ENST00000396096 CDKN1CP49918 316 aaPredicted RBP16.7■□□□□ 0.26
NUP50-202ENST00000396096 PKNOX1P55347 436 aa16.7■□□□□ 0.26
NUP50-202ENST00000396096 MS4A2Q01362 244 aa16.7■□□□□ 0.26
NUP50-202ENST00000396096 OGFRL1Q5TC84 451 aaPredicted RBP16.7■□□□□ 0.26
NUP50-202ENST00000396096 LINGO4Q6UY18 593 aa16.7■□□□□ 0.26
NUP50-202ENST00000396096 PQLC1Q8N2U9 271 aa16.7■□□□□ 0.26
NUP50-202ENST00000396096 FBXO39Q8N4B4 442 aa16.7■□□□□ 0.26
NUP50-202ENST00000396096 CARNMT1Q8N4J0 409 aa16.7■□□□□ 0.26
NUP50-202ENST00000396096 C3orf30Q96M34 536 aa16.7■□□□□ 0.26
NUP50-202ENST00000396096 RC3H2Q9HBD1 1191 aaKnown RBP16.7■□□□□ 0.26
NUP50-202ENST00000396096 SUCOQ9UBS9 1254 aaKnown RBP16.7■□□□□ 0.26
NUP50-202ENST00000396096 TRIM17Q9Y577 477 aa16.7■□□□□ 0.26
NUP50-202ENST00000396096 SUPT3HB4E1H0 165 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 PRRG1O14668 218 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 SUPT3HO75486 399 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 TSPAN12O95859 305 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 ATN1P54259 1190 aaPredicted RBP16.69■□□□□ 0.26
NUP50-202ENST00000396096 EPHB3P54753 998 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 LCP2Q13094 533 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 CTSL3PQ5NE16 218 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 C8orf82Q6P1X6 216 aaPredicted RBP16.69■□□□□ 0.26
NUP50-202ENST00000396096 TMEM154Q6P9G4 183 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 TXNDC11Q6PKC3 985 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 PHYKPLQ8IUZ5 450 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 DCAF4L2Q8NA75 395 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 TWIST2Q8WVJ9 160 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 USP13Q92995 863 aaPredicted RBP16.69■□□□□ 0.26
NUP50-202ENST00000396096 TOP1MTQ969P6 601 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 FUBP1Q96AE4 644 aaKnown RBP16.69■□□□□ 0.26
NUP50-202ENST00000396096 TMA16Q96EY4 203 aaKnown RBP16.69■□□□□ 0.26
NUP50-202ENST00000396096 CYP2S1Q96SQ9 504 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 C19orf43Q9BQ61 176 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 VCXQ9H320 206 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 AKTIPQ9H8T0 292 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 SMPD4Q9NXE4 827 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 INSL5Q9Y5Q6 135 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 TYW5A2RUC4 315 aaKnown RBP16.69■□□□□ 0.26
NUP50-202ENST00000396096 LRRC14BA6NHZ5 514 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 ALDOCP09972 364 aaKnown RBP16.69■□□□□ 0.26
NUP50-202ENST00000396096 GPX3P22352 226 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 PEX2P28328 305 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 EEF1DP29692 281 aaKnown RBP16.69■□□□□ 0.26
NUP50-202ENST00000396096 PTGER3P43115 390 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 RHOAP61586 193 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 AP1S1P61966 158 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 TLE2Q04725 743 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms