RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 PAQR3Q6TCH7 311 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 ZNF683Q8IZ20 524 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 OFCC1Q8IZS5 231 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 DCBLD1Q8N8Z6 715 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 MYEOVQ96EZ4 313 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 SLC39A13Q96H72 371 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 TEX37Q96LM6 180 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 C1orf74Q96LT6 269 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 SMIM14Q96QK8 99 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 ADI1Q9BV57 179 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 TRIM15Q9C019 465 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 MUC3BQ9H195 1237 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 SOX17Q9H6I2 414 aaPredicted RBP13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 CATSPERZQ9NTU4 200 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 TMEM248Q9NWD8 314 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 RHBDL2Q9NX52 303 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 USP22Q9UPT9 525 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 RAMP2O60895 175 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 FASP25445 335 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 ATP6V0D1P61421 351 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 CLCQ05315 142 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 CYP51A1Q16850 503 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 HABP4Q5JVS0 413 aaKnown RBP13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 MSANTD2Q6P1R3 559 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 CAMK1DQ8IU85 385 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 TTC9BQ8N6N2 239 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 TTC16Q8NEE8 873 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 ZUFSPQ96AP4 578 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 ATOH8Q96SQ7 321 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 C1orf50Q9BV19 199 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 ABCD2Q9UBJ2 740 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 RNF112Q9ULX5 631 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 SLC8A2Q9UPR5 921 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 MYO16Q9Y6X6 1858 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 COL4A4P53420 1690 aaPredicted RBP13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 LOC285095A0A1B0GVY8 99 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 SLC26A3P40879 764 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 ZNF235Q14590 738 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 TSNQ15631 228 aaKnown RBP13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 MON1AQ86VX9 555 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 FBXO39Q8N4B4 442 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 KLHDC9Q8NEP7 349 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 OR4L1Q8NH43 312 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 SUSD3Q96L08 255 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 B3GALT6Q96L58 329 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 TMEM74Q96NL1 305 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 DCUN1D5Q9BTE7 237 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 TIMMDC1Q9NPL8 285 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 IRAK4Q9NWZ3 460 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 EBF1Q9UH73 591 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 ENPP3O14638 875 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 PFDN1O60925 122 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 RPP40O75818 363 aaKnown RBP13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 FGF4P08620 206 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 AGTR2P50052 363 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 MERTKQ12866 999 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 GALNT7Q86SF2 657 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 ADGRG5Q8IZF4 528 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 MINDY1Q8N5J2 469 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 AGPAT4Q9NRZ5 378 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 GID8Q9NWU2 228 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 SLAMF8Q9P0V8 285 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 AQP12BA6NM10 295 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 FAM155AB1AL88 458 aaPredicted RBP13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 CDC7O00311 574 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 EI24O14681 340 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 TNPO2O14787 897 aaKnown RBP13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 OR1E1P30953 314 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 STT3AP46977 705 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 ARPP19P56211 112 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 NRG1Q02297 640 aaPredicted RBP13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 TMED1Q13445 227 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 DCTN2Q13561 401 aaKnown RBP13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 GPR141Q7Z602 305 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 EGFL6Q8IUX8 553 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 ERI1Q8IV48 349 aaKnown RBP13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 AQP12AQ8IXF9 295 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 CFAP52Q8N1V2 620 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 HM13Q8TCT9 377 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 ABTB1Q969K4 478 aaPredicted RBP13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 ACOX2Q99424 681 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 SEPHS2Q99611 448 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 MTG1Q9BT17 334 aaPredicted RBP13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 AARSD1Q9BTE6 412 aaKnown RBP13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 POLR1EQ9GZS1 481 aaKnown RBP13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 SDR39U1Q9NRG7 319 aaPredicted RBP13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 TSR3Q9UJK0 312 aaKnown RBP13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 PRG3Q9Y2Y8 225 aaPredicted RBP13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 NLRC5Q86WI3 1866 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 PTPRDP23468 1912 aa13.88□□□□□ -0.19
GAPVD1-205ENST00000394084 A0A0J9YVX5 310 aa13.87□□□□□ -0.19
GAPVD1-205ENST00000394084 ECI2O75521 394 aa13.87□□□□□ -0.19
GAPVD1-205ENST00000394084 GSK3BP49841 420 aa13.87□□□□□ -0.19
GAPVD1-205ENST00000394084 LPIN1Q14693 890 aa13.87□□□□□ -0.19
GAPVD1-205ENST00000394084 PAGE3Q5JUK9 113 aa13.87□□□□□ -0.19
GAPVD1-205ENST00000394084 PRMT9Q6P2P2 845 aa13.87□□□□□ -0.19
GAPVD1-205ENST00000394084 BLOC1S3Q6QNY0 202 aa13.87□□□□□ -0.19
GAPVD1-205ENST00000394084 ZNF280BQ86YH2 543 aa13.87□□□□□ -0.19
GAPVD1-205ENST00000394084 TEX26Q8N6G2 289 aa13.87□□□□□ -0.19
GAPVD1-205ENST00000394084 EXOC2Q96KP1 924 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms