RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 ZNF234Q14588 700 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 CHRNA6Q15825 494 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 DBN1Q16643 649 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 ZNF805Q5CZA5 627 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 KLC3Q6P597 504 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 MTSS1LQ765P7 747 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 SERPINA9Q86WD7 417 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 SPATS2Q86XZ4 545 aaKnown RBP8.6□□□□□ -1.03
TDP1-203ENST00000393454 FSTL5Q8N475 847 aaPredicted RBP8.6□□□□□ -1.03
TDP1-203ENST00000393454 RAB3IL1Q8TBN0 382 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 SUSD6Q92537 303 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 SGF29Q96ES7 293 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 MCCC1Q96RQ3 725 aaPredicted RBP8.6□□□□□ -1.03
TDP1-203ENST00000393454 ZNF395Q9H8N7 513 aaPredicted RBP8.6□□□□□ -1.03
TDP1-203ENST00000393454 ZDHHC4Q9NPG8 344 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 IL26Q9NPH9 171 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 IGSF5Q9NSI5 407 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 KLHL14Q9P2G3 628 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 XPR1Q9UBH6 696 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 CRLS1Q9UJA2 301 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 FAM50BQ9Y247 325 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 ARL2BPQ9Y2Y0 163 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 PPIL1Q9Y3C6 166 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 TNRC18O15417 2968 aaPredicted RBP8.6□□□□□ -1.03
TDP1-203ENST00000393454 C16orf96A6NNT2 1141 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 UPK3BL1B0FP48 263 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 E5RI56 91 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 UPK3BL2E5RIL1 263 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 ECI2O75521 394 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 KAT7O95251 611 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 PRNPP04156 253 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 APODP05090 189 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 FGF3P11487 239 aaPredicted RBP8.6□□□□□ -1.03
TDP1-203ENST00000393454 PKMP14618 531 aaKnown RBP8.6□□□□□ -1.03
TDP1-203ENST00000393454 TIMP2P16035 220 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 CHRM3P20309 590 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 LHCGRP22888 699 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 VIPR1P32241 457 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 PTGER3P43115 390 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 ITGA9Q13797 1035 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 ADGRE1Q14246 886 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 ITIH4Q14624 930 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 HNRNPA1L2Q32P51 320 aaKnown RBP8.6□□□□□ -1.03
TDP1-203ENST00000393454 PREPLQ4J6C6 727 aaPredicted RBP8.6□□□□□ -1.03
TDP1-203ENST00000393454 NUDT18Q6ZVK8 323 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 SNX20Q7Z614 316 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 CCDC91Q7Z6B0 441 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 GPR26Q8NDV2 337 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 RDH11Q8TC12 318 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 ZNF398Q8TD17 642 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 CSGALNACT1Q8TDX6 532 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 ANKRD49Q8WVL7 239 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 OR8D1Q8WZ84 308 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 CHFRQ96EP1 664 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 LRIG1Q96JA1 1093 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 MSLNLQ96KJ4 702 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 FAM161BQ96MY7 647 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 NECTIN4Q96NY8 510 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 GPR78Q96P69 363 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 MRPL57Q9BQC6 102 aaKnown RBP8.6□□□□□ -1.03
TDP1-203ENST00000393454 TRIM55Q9BYV6 548 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 TTYH1Q9H313 450 aaPredicted RBP8.6□□□□□ -1.03
TDP1-203ENST00000393454 SARS2Q9NP81 518 aaKnown RBP8.6□□□□□ -1.03
TDP1-203ENST00000393454 PCDH12Q9NPG4 1184 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 TAS2R13Q9NYV9 303 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 CD84Q9UIB8 345 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 DCTN4Q9UJW0 460 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 NUMBLQ9Y6R0 609 aa8.6□□□□□ -1.03
TDP1-203ENST00000393454 G3V2L1 256 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 H3BQ06 376 aaPredicted RBP8.59□□□□□ -1.03
TDP1-203ENST00000393454 HGSO14964 777 aaPredicted RBP8.59□□□□□ -1.03
TDP1-203ENST00000393454 NIPSNAP2O75323 286 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 VPS26AO75436 327 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 LYPLA1O75608 230 aaPredicted RBP8.59□□□□□ -1.03
TDP1-203ENST00000393454 KIAA0754O94854 1291 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 IL1BP01584 269 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 SERPINE1P05121 402 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 PYGLP06737 847 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 C1SP09871 688 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 KITP10721 976 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 GRIA2P42262 883 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 SOX9P48436 509 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 SLC1A6P48664 564 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 NFATC2Q13469 925 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 C9orf64Q5T6V5 341 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 CES4AQ5XG92 561 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 ERAP2Q6P179 960 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 TMEM207Q6UWW9 146 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 ZYG11AQ6WRX3 759 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 CERS6Q6ZMG9 384 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 RFLNAQ6ZTI6 216 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 CRLF3Q8IUI8 442 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 CBARPQ8N350 705 aaPredicted RBP8.59□□□□□ -1.03
TDP1-203ENST00000393454 PHTF2Q8N3S3 785 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 PPP4R1Q8TF05 950 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 BIRC8Q96P09 236 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 GPR21Q99679 349 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 CLPBQ9H078 707 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 MRPL46Q9H2W6 279 aaKnown RBP8.59□□□□□ -1.03
TDP1-203ENST00000393454 THAP1Q9NVV9 213 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms