RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 ZDHHC5Q9C0B5 715 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 CAPN10Q9HC96 672 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 CHRAC1Q9NRG0 131 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 DGKBQ9Y6T7 804 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 GLYATL1P3A0A0U1RQE8 302 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 CHUKO15111 745 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 RAD51BO15315 384 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 STX7O15400 261 aaKnown RBP13.19□□□□□ -0.3
USP44-202ENST00000393091 VEGFDO43915 354 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 KCNJ13O60928 360 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 SRP72O76094 671 aaKnown RBP13.19□□□□□ -0.3
USP44-202ENST00000393091 IVLP07476 585 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 NFATC2Q13469 925 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 CRYMQ14894 314 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 RASA2Q15283 850 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 LONRF1Q17RB8 773 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 ZNF423Q2M1K9 1284 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 POM121L1PQ3SYA9 428 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 FAM160A2Q8N612 972 aaPredicted RBP13.19□□□□□ -0.3
USP44-202ENST00000393091 HNRNPLLQ8WVV9 542 aaKnown RBP13.19□□□□□ -0.3
USP44-202ENST00000393091 INTS10Q9NVR2 710 aaKnown RBP13.19□□□□□ -0.3
USP44-202ENST00000393091 CORO1CQ9ULV4 474 aaPredicted RBP13.19□□□□□ -0.3
USP44-202ENST00000393091 SPAG17Q6Q759 2223 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 A0A1B0GTW7 788 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 FADS2P1A8MWK0 482 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 FPGTO14772 594 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 DFNA5O60443 496 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 FOXD2O60548 495 aaPredicted RBP13.18□□□□□ -0.3
USP44-202ENST00000393091 AP2A2O94973 939 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 PCDH8O95206 1070 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 PRKCGP05129 697 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 NMBRP28336 390 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 TERF1P54274 439 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 PLTPP55058 493 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 POU6F1Q14863 301 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 ACOX1Q15067 660 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 BCL7AQ4VC05 210 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 MACC1Q6ZN28 852 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 UNC5AQ6ZN44 842 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 Q6ZVL8 140 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 GSDMBQ8TAX9 411 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 GANCQ8TET4 914 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 RLN3Q8WXF3 142 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 WRAP53Q9BUR4 548 aaKnown RBP13.18□□□□□ -0.3
USP44-202ENST00000393091 TM9SF3Q9HD45 589 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 NSMCE4AQ9NXX6 385 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 KLHL42Q9P2K6 505 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 COMMD10Q9Y6G5 202 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 NCOR1O75376 2440 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 FAM159BA6NKW6 160 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 F5H423 210 aaPredicted RBP13.18□□□□□ -0.3
USP44-202ENST00000393091 TPH1P17752 444 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 ELK3P41970 407 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 RNF187Q5TA31 235 aaPredicted RBP13.18□□□□□ -0.3
USP44-202ENST00000393091 EMBQ6PCB8 327 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 OXR1Q8N573 874 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.18□□□□□ -0.3
USP44-202ENST00000393091 HIC2Q96JB3 615 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 DNAJC1Q96KC8 554 aaKnown RBP13.18□□□□□ -0.3
USP44-202ENST00000393091 APOOQ9BUR5 198 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 MBNL1Q9NR56 388 aaKnown RBP13.18□□□□□ -0.3
USP44-202ENST00000393091 SAMD15Q9P1V8 674 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 ZNF883P0CG24 379 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 MAGEA4P43358 317 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 RXRGP48443 463 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 GPX6P59796 221 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 PTK2BQ14289 1009 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 NFATC4Q14934 902 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 AARS2Q5JTZ9 985 aaKnown RBP13.18□□□□□ -0.3
USP44-202ENST00000393091 MYRIPQ8NFW9 859 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 OR13C4Q8NGS5 318 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 CALML6Q8TD86 181 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 UBXN4Q92575 508 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 AP2M1Q96CW1 435 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 FAM167BQ9BTA0 163 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 GPR34Q9UPC5 381 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 KCTD3Q9Y597 815 aa13.18□□□□□ -0.3
USP44-202ENST00000393091 YKT6O15498 198 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 LZTS3O60299 673 aaPredicted RBP13.17□□□□□ -0.3
USP44-202ENST00000393091 TCEA3O75764 348 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 FAM155BO75949 473 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 RETP07949 1114 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 ACRV1P26436 265 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 PXNP49023 591 aaPredicted RBP13.17□□□□□ -0.3
USP44-202ENST00000393091 NXPH1P58417 271 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 STAT4Q14765 748 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 DUOXA1Q1HG43 343 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 C2CD4AQ8NCU7 369 aaPredicted RBP13.17□□□□□ -0.3
USP44-202ENST00000393091 OR4L1Q8NH43 312 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 GLYATL1Q969I3 302 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 RIOK2Q9BVS4 552 aaKnown RBP13.17□□□□□ -0.3
USP44-202ENST00000393091 P2RY12Q9H244 342 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 PPCSQ9HAB8 311 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 VPS9D1Q9Y2B5 631 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 LEPRP48357 1165 aaKnown RBP13.17□□□□□ -0.3
USP44-202ENST00000393091 CSRP3P50461 194 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 ARSDP51689 593 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 SESN2P58004 480 aaPredicted RBP13.17□□□□□ -0.3
USP44-202ENST00000393091 CDK3Q00526 305 aa13.17□□□□□ -0.3
USP44-202ENST00000393091 DMPKQ09013 629 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms