RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 SERPINI1Q99574 410 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 CRISPLD2Q9H0B8 497 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 STK39Q9UEW8 545 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 K7ERQ8 282 aa25.48■■□□□ 1.67
SMARCD3-203ENST00000392811 PPP6CO00743 305 aa25.48■■□□□ 1.67
SMARCD3-203ENST00000392811 CDK14O94921 469 aa25.48■■□□□ 1.67
SMARCD3-203ENST00000392811 ENO3P13929 434 aaPredicted RBP25.48■■□□□ 1.67
SMARCD3-203ENST00000392811 GFAPP14136 432 aa25.48■■□□□ 1.67
SMARCD3-203ENST00000392811 PKMP14618 531 aaKnown RBP25.48■■□□□ 1.67
SMARCD3-203ENST00000392811 CYP4F8P98187 520 aa25.48■■□□□ 1.67
SMARCD3-203ENST00000392811 SQLEQ14534 574 aa25.48■■□□□ 1.67
SMARCD3-203ENST00000392811 UGT3A2Q3SY77 523 aa25.48■■□□□ 1.67
SMARCD3-203ENST00000392811 DCAF4L2Q8NA75 395 aa25.48■■□□□ 1.67
SMARCD3-203ENST00000392811 SLC30A3Q99726 388 aa25.48■■□□□ 1.67
SMARCD3-203ENST00000392811 NPAS2Q99743 824 aa25.48■■□□□ 1.67
SMARCD3-203ENST00000392811 WDR41Q9HAD4 459 aa25.48■■□□□ 1.67
SMARCD3-203ENST00000392811 HACD3Q9P035 362 aa25.48■■□□□ 1.67
SMARCD3-203ENST00000392811 RNF112Q9ULX5 631 aa25.48■■□□□ 1.67
SMARCD3-203ENST00000392811 SUPT3HB4E1H0 165 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 SUPT3HO75486 399 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 CLTBP09497 229 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 ATP6V0D1P61421 351 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 ART3Q13508 389 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 FAM217AQ8IXS0 508 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 APCDD1Q8J025 514 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 CLYBLQ8N0X4 340 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 NSUN5Q96P11 429 aaKnown RBP25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 ASB2Q96Q27 587 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 H7C0S8 307 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 NIPSNAP2O75323 286 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 PRAMEF12O95522 483 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 GABRR2P28476 465 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 WDR5P61964 334 aaKnown RBP25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 TSNQ15631 228 aaKnown RBP25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 CTSL3PQ5NE16 218 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 RNF111Q6ZNA4 994 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 MFN1Q8IWA4 741 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 MID1IP1Q9NPA3 183 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 BATF3Q9NR55 127 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 ZNF711Q9Y462 761 aa25.47■■□□□ 1.67
SMARCD3-203ENST00000392811 CDC7O00311 574 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 PFDN6O15212 129 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 CFLARO15519 480 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 LILRB3O75022 631 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 VPS26AO75436 327 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 GPC4O75487 556 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 ECI2O75521 394 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 PYGLP06737 847 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 ITGB8P26012 769 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 DPP6P42658 865 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 THOP1P52888 689 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 PIGGQ5H8A4 983 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 LARP4Q71RC2 724 aaKnown RBP eCLIP25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 GAREM2Q75VX8 874 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 C19orf60Q96EN9 201 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 C3orf30Q96M34 536 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 ZNF184Q99676 751 aaPredicted RBP25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 TM6SF2Q9BZW4 377 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 MRGBPQ9NV56 204 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 PCDH10Q9P2E7 1040 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 MAFFQ9ULX9 164 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 ATP6AP2A0A1C7CYW4 349 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 ATP6AP2O75787 350 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 CSF2RAP15509 400 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 CTPS1P17812 591 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 FASTKQ14296 549 aaKnown RBP25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 ZNF423Q2M1K9 1284 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 ANO7Q6IWH7 933 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 DHDDSQ86SQ9 333 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 FBXO39Q8N4B4 442 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 NKAPQ8N5F7 415 aaKnown RBP25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 SIDT2Q8NBJ9 832 aaKnown RBP25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 DDI1Q8WTU0 396 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 IL17CQ9P0M4 197 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 DNAJC15Q9Y5T4 150 aa25.46■■□□□ 1.67
SMARCD3-203ENST00000392811 NPEPPSL1A6NEC2 478 aa25.45■■□□□ 1.66
SMARCD3-203ENST00000392811 PSMD12O00232 456 aaPredicted RBP25.45■■□□□ 1.66
SMARCD3-203ENST00000392811 CLASP2O75122 1294 aaKnown RBP25.45■■□□□ 1.66
SMARCD3-203ENST00000392811 FGF4P08620 206 aa25.45■■□□□ 1.66
SMARCD3-203ENST00000392811 CA8P35219 290 aa25.45■■□□□ 1.66
SMARCD3-203ENST00000392811 PKNOX1P55347 436 aa25.45■■□□□ 1.66
SMARCD3-203ENST00000392811 XIAPP98170 497 aa25.45■■□□□ 1.66
SMARCD3-203ENST00000392811 PTK2BQ14289 1009 aa25.45■■□□□ 1.66
SMARCD3-203ENST00000392811 KBTBD6Q86V97 674 aa25.45■■□□□ 1.66
SMARCD3-203ENST00000392811 OR6K2Q8NGY2 324 aa25.45■■□□□ 1.66
SMARCD3-203ENST00000392811 USP13Q92995 863 aaPredicted RBP25.45■■□□□ 1.66
SMARCD3-203ENST00000392811 FUBP1Q96AE4 644 aaKnown RBP25.45■■□□□ 1.66
SMARCD3-203ENST00000392811 EID2BQ96D98 161 aa25.45■■□□□ 1.66
SMARCD3-203ENST00000392811 MYO19Q96H55 970 aa25.45■■□□□ 1.66
SMARCD3-203ENST00000392811 LSM7Q9UK45 103 aaKnown RBP25.45■■□□□ 1.66
SMARCD3-203ENST00000392811 LRCH1Q9Y2L9 728 aa25.45■■□□□ 1.66
SMARCD3-203ENST00000392811 GPR39O43194 453 aa25.44■■□□□ 1.66
SMARCD3-203ENST00000392811 SMAD6O43541 496 aaKnown RBP25.44■■□□□ 1.66
SMARCD3-203ENST00000392811 ALPIP09923 528 aa25.44■■□□□ 1.66
SMARCD3-203ENST00000392811 EEF1DP29692 281 aaKnown RBP25.44■■□□□ 1.66
SMARCD3-203ENST00000392811 AP1S1P61966 158 aa25.44■■□□□ 1.66
SMARCD3-203ENST00000392811 CEACAM7Q14002 265 aa25.44■■□□□ 1.66
SMARCD3-203ENST00000392811 AGKQ53H12 422 aa25.44■■□□□ 1.66
SMARCD3-203ENST00000392811 AARS2Q5JTZ9 985 aaKnown RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms